RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 USH2AO75445 5202 aa4.07□□□□□ -1.76
SOCS6-201ENST00000397942 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
SOCS6-201ENST00000397942 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
SOCS6-201ENST00000397942 SPRR2EP22531 72 aa4.02□□□□□ -1.77
SOCS6-201ENST00000397942 SPRR2BP35325 72 aa4.02□□□□□ -1.77
SOCS6-201ENST00000397942 SPRR2AP35326 72 aa4.02□□□□□ -1.77
SOCS6-201ENST00000397942 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
SOCS6-201ENST00000397942 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
SOCS6-201ENST00000397942 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
SOCS6-201ENST00000397942 MT1MQ8N339 61 aa3.94□□□□□ -1.78
SOCS6-201ENST00000397942 KMT2DO14686 5537 aa3.94□□□□□ -1.78
SOCS6-201ENST00000397942 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
SOCS6-201ENST00000397942 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
SOCS6-201ENST00000397942 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.79
SOCS6-201ENST00000397942 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
SOCS6-201ENST00000397942 SPRR2DP22532 72 aa3.86□□□□□ -1.79
SOCS6-201ENST00000397942 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
SOCS6-201ENST00000397942 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
SOCS6-201ENST00000397942 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
SOCS6-201ENST00000397942 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
SOCS6-201ENST00000397942 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
SOCS6-201ENST00000397942 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
SOCS6-201ENST00000397942 MT3P25713 68 aa3.67□□□□□ -1.82
SOCS6-201ENST00000397942 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
SOCS6-201ENST00000397942 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
SOCS6-201ENST00000397942 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
SOCS6-201ENST00000397942 MT1AP04731 61 aa3.62□□□□□ -1.83
SOCS6-201ENST00000397942 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
SOCS6-201ENST00000397942 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
SOCS6-201ENST00000397942 PRM1P04553 51 aa3.59□□□□□ -1.83
SOCS6-201ENST00000397942 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
SOCS6-201ENST00000397942 MT4P47944 62 aa3.5□□□□□ -1.85
SOCS6-201ENST00000397942 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
SOCS6-201ENST00000397942 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
SOCS6-201ENST00000397942 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
SOCS6-201ENST00000397942 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
SOCS6-201ENST00000397942 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SOCS6-201ENST00000397942 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
SOCS6-201ENST00000397942 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
SOCS6-201ENST00000397942 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
SOCS6-201ENST00000397942 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
SOCS6-201ENST00000397942 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.21□□□□□ -1.9
SOCS6-201ENST00000397942 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
SOCS6-201ENST00000397942 NEBP20929 6669 aa3.08□□□□□ -1.92
SOCS6-201ENST00000397942 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
SOCS6-201ENST00000397942 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
SOCS6-201ENST00000397942 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
SOCS6-201ENST00000397942 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
SOCS6-201ENST00000397942 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
SOCS6-201ENST00000397942 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
SOCS6-201ENST00000397942 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
SOCS6-201ENST00000397942 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
SOCS6-201ENST00000397942 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
SOCS6-201ENST00000397942 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
SOCS6-201ENST00000397942 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
SOCS6-201ENST00000397942 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SOCS6-201ENST00000397942 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
SOCS6-201ENST00000397942 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
SOCS6-201ENST00000397942 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
SOCS6-201ENST00000397942 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
SOCS6-201ENST00000397942 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
SOCS6-201ENST00000397942 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
SOCS6-201ENST00000397942 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
SOCS6-201ENST00000397942 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
SOCS6-201ENST00000397942 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
SOCS6-201ENST00000397942 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
SOCS6-201ENST00000397942 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
SOCS6-201ENST00000397942 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
SOCS6-201ENST00000397942 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
SOCS6-201ENST00000397942 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
SOCS6-201ENST00000397942 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SOCS6-201ENST00000397942 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
SOCS6-201ENST00000397942 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
SOCS6-201ENST00000397942 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SOCS6-201ENST00000397942 PHGR1C9JFL3 82 aa1.59□□□□□ -2.16
SOCS6-201ENST00000397942 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SOCS6-201ENST00000397942 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 112.7 ms