RNA–Protein interactions for RNA: ENST00000397091.9

FGFR1-206, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 5,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-206ENST00000397091 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
FGFR1-206ENST00000397091 ABCA13Q86UQ4 5058 aa5.45□□□□□ -1.54
FGFR1-206ENST00000397091 LCE1BQ5T7P3 118 aa5.44□□□□□ -1.54
FGFR1-206ENST00000397091 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
FGFR1-206ENST00000397091 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
FGFR1-206ENST00000397091 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
FGFR1-206ENST00000397091 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
FGFR1-206ENST00000397091 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
FGFR1-206ENST00000397091 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
FGFR1-206ENST00000397091 FLGP20930 4061 aaPredicted RBP5.32□□□□□ -1.56
FGFR1-206ENST00000397091 TNXBP22105 4242 aa5.31□□□□□ -1.56
FGFR1-206ENST00000397091 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
FGFR1-206ENST00000397091 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
FGFR1-206ENST00000397091 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
FGFR1-206ENST00000397091 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
FGFR1-206ENST00000397091 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
FGFR1-206ENST00000397091 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
FGFR1-206ENST00000397091 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
FGFR1-206ENST00000397091 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
FGFR1-206ENST00000397091 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
FGFR1-206ENST00000397091 MT1AP04731 61 aa5.17□□□□□ -1.58
FGFR1-206ENST00000397091 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
FGFR1-206ENST00000397091 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
FGFR1-206ENST00000397091 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
FGFR1-206ENST00000397091 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
FGFR1-206ENST00000397091 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
FGFR1-206ENST00000397091 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
FGFR1-206ENST00000397091 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
FGFR1-206ENST00000397091 MUC2Q02817 5179 aa4.99□□□□□ -1.61
FGFR1-206ENST00000397091 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
FGFR1-206ENST00000397091 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
FGFR1-206ENST00000397091 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
FGFR1-206ENST00000397091 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.64
FGFR1-206ENST00000397091 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
FGFR1-206ENST00000397091 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
FGFR1-206ENST00000397091 LCE1CQ5T751 118 aa4.75□□□□□ -1.65
FGFR1-206ENST00000397091 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
FGFR1-206ENST00000397091 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
FGFR1-206ENST00000397091 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
FGFR1-206ENST00000397091 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
FGFR1-206ENST00000397091 NEBP20929 6669 aa4.33□□□□□ -1.72
FGFR1-206ENST00000397091 USH2AO75445 5202 aa4.3□□□□□ -1.72
FGFR1-206ENST00000397091 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
FGFR1-206ENST00000397091 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
FGFR1-206ENST00000397091 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
FGFR1-206ENST00000397091 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
FGFR1-206ENST00000397091 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
FGFR1-206ENST00000397091 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
FGFR1-206ENST00000397091 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
FGFR1-206ENST00000397091 KMT2DO14686 5537 aa4.05□□□□□ -1.76
FGFR1-206ENST00000397091 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
FGFR1-206ENST00000397091 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
FGFR1-206ENST00000397091 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
FGFR1-206ENST00000397091 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
FGFR1-206ENST00000397091 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
FGFR1-206ENST00000397091 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
FGFR1-206ENST00000397091 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
FGFR1-206ENST00000397091 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
FGFR1-206ENST00000397091 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
FGFR1-206ENST00000397091 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
FGFR1-206ENST00000397091 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
FGFR1-206ENST00000397091 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
FGFR1-206ENST00000397091 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
FGFR1-206ENST00000397091 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
FGFR1-206ENST00000397091 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
FGFR1-206ENST00000397091 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
FGFR1-206ENST00000397091 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
FGFR1-206ENST00000397091 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
FGFR1-206ENST00000397091 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
FGFR1-206ENST00000397091 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
FGFR1-206ENST00000397091 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
FGFR1-206ENST00000397091 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
FGFR1-206ENST00000397091 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
FGFR1-206ENST00000397091 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
FGFR1-206ENST00000397091 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
FGFR1-206ENST00000397091 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
FGFR1-206ENST00000397091 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 67.1 ms