RNA–Protein interactions for RNA: ENST00000396658.8

UBN1-202, Transcript of ubinuclein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBN1, Length 6,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBN1-202ENST00000396658 TNXBP22105 4242 aa3.59□□□□□ -1.83
UBN1-202ENST00000396658 HERC2O95714 4834 aa3.57□□□□□ -1.84
UBN1-202ENST00000396658 KRTAP19-2Q3LHN2 52 aa3.56□□□□□ -1.84
UBN1-202ENST00000396658 LRP2P98164 4655 aa3.55□□□□□ -1.84
UBN1-202ENST00000396658 MT1AP04731 61 aa3.55□□□□□ -1.84
UBN1-202ENST00000396658 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
UBN1-202ENST00000396658 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
UBN1-202ENST00000396658 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
UBN1-202ENST00000396658 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
UBN1-202ENST00000396658 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
UBN1-202ENST00000396658 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
UBN1-202ENST00000396658 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
UBN1-202ENST00000396658 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
UBN1-202ENST00000396658 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
UBN1-202ENST00000396658 KMT2CQ8NEZ4 4911 aaKnown RBP3.47□□□□□ -1.85
UBN1-202ENST00000396658 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
UBN1-202ENST00000396658 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
UBN1-202ENST00000396658 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
UBN1-202ENST00000396658 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
UBN1-202ENST00000396658 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
UBN1-202ENST00000396658 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
UBN1-202ENST00000396658 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
UBN1-202ENST00000396658 EPPK1P58107 5090 aaKnown RBP3.32□□□□□ -1.88
UBN1-202ENST00000396658 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
UBN1-202ENST00000396658 LCE2AQ5TA79 106 aaPredicted RBP3.24□□□□□ -1.89
UBN1-202ENST00000396658 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
UBN1-202ENST00000396658 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
UBN1-202ENST00000396658 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
UBN1-202ENST00000396658 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
UBN1-202ENST00000396658 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
UBN1-202ENST00000396658 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
UBN1-202ENST00000396658 HMCN2Q8NDA2 5059 aa3.14□□□□□ -1.91
UBN1-202ENST00000396658 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
UBN1-202ENST00000396658 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
UBN1-202ENST00000396658 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
UBN1-202ENST00000396658 MUC2Q02817 5179 aa3.08□□□□□ -1.92
UBN1-202ENST00000396658 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
UBN1-202ENST00000396658 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
UBN1-202ENST00000396658 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
UBN1-202ENST00000396658 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
UBN1-202ENST00000396658 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
UBN1-202ENST00000396658 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
UBN1-202ENST00000396658 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
UBN1-202ENST00000396658 KMT2DO14686 5537 aa2.75□□□□□ -1.97
UBN1-202ENST00000396658 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
UBN1-202ENST00000396658 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
UBN1-202ENST00000396658 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
UBN1-202ENST00000396658 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
UBN1-202ENST00000396658 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
UBN1-202ENST00000396658 USH2AO75445 5202 aa2.62□□□□□ -1.99
UBN1-202ENST00000396658 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -1.99
UBN1-202ENST00000396658 NEBP20929 6669 aa2.58□□□□□ -2
UBN1-202ENST00000396658 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
UBN1-202ENST00000396658 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
UBN1-202ENST00000396658 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
UBN1-202ENST00000396658 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
UBN1-202ENST00000396658 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
UBN1-202ENST00000396658 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
UBN1-202ENST00000396658 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
UBN1-202ENST00000396658 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
UBN1-202ENST00000396658 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
UBN1-202ENST00000396658 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
UBN1-202ENST00000396658 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
UBN1-202ENST00000396658 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
UBN1-202ENST00000396658 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
UBN1-202ENST00000396658 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
UBN1-202ENST00000396658 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
UBN1-202ENST00000396658 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
UBN1-202ENST00000396658 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
UBN1-202ENST00000396658 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
UBN1-202ENST00000396658 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.16
UBN1-202ENST00000396658 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
UBN1-202ENST00000396658 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
UBN1-202ENST00000396658 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
UBN1-202ENST00000396658 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
UBN1-202ENST00000396658 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
UBN1-202ENST00000396658 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms