RNA–Protein interactions for RNA: ENST00000396252.6

NBN-202, Transcript of nibrin, humanhuman

TSL 5

Gene NBN, Length 4,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBN-202ENST00000396252 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
NBN-202ENST00000396252 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.82
NBN-202ENST00000396252 SPRR2DP22532 72 aa3.65□□□□□ -1.83
NBN-202ENST00000396252 MUC2Q02817 5179 aa3.63□□□□□ -1.83
NBN-202ENST00000396252 MT1MQ8N339 61 aa3.62□□□□□ -1.83
NBN-202ENST00000396252 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
NBN-202ENST00000396252 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
NBN-202ENST00000396252 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
NBN-202ENST00000396252 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
NBN-202ENST00000396252 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
NBN-202ENST00000396252 LCE2AQ5TA79 106 aaPredicted RBP3.53□□□□□ -1.84
NBN-202ENST00000396252 LCE2DQ5TA82 110 aaPredicted RBP3.51□□□□□ -1.85
NBN-202ENST00000396252 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
NBN-202ENST00000396252 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
NBN-202ENST00000396252 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
NBN-202ENST00000396252 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
NBN-202ENST00000396252 PRM1P04553 51 aa3.41□□□□□ -1.86
NBN-202ENST00000396252 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.86
NBN-202ENST00000396252 MT3P25713 68 aa3.4□□□□□ -1.87
NBN-202ENST00000396252 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
NBN-202ENST00000396252 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
NBN-202ENST00000396252 MT1AP04731 61 aa3.34□□□□□ -1.88
NBN-202ENST00000396252 USH2AO75445 5202 aa3.31□□□□□ -1.88
NBN-202ENST00000396252 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
NBN-202ENST00000396252 KRTAP9-2Q9BYQ4 174 aa3.3□□□□□ -1.88
NBN-202ENST00000396252 MT4P47944 62 aa3.28□□□□□ -1.88
NBN-202ENST00000396252 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
NBN-202ENST00000396252 KMT2DO14686 5537 aa3.21□□□□□ -1.9
NBN-202ENST00000396252 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
NBN-202ENST00000396252 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
NBN-202ENST00000396252 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
NBN-202ENST00000396252 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
NBN-202ENST00000396252 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.92
NBN-202ENST00000396252 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
NBN-202ENST00000396252 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
NBN-202ENST00000396252 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
NBN-202ENST00000396252 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
NBN-202ENST00000396252 KRTAP9-6A0A140TA67 174 aa2.98□□□□□ -1.93
NBN-202ENST00000396252 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
NBN-202ENST00000396252 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
NBN-202ENST00000396252 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
NBN-202ENST00000396252 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
NBN-202ENST00000396252 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
NBN-202ENST00000396252 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
NBN-202ENST00000396252 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
NBN-202ENST00000396252 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
NBN-202ENST00000396252 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
NBN-202ENST00000396252 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
NBN-202ENST00000396252 NEBP20929 6669 aa2.6□□□□□ -1.99
NBN-202ENST00000396252 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
NBN-202ENST00000396252 LCE1CQ5T751 118 aa2.55□□□□□ -2
NBN-202ENST00000396252 LCE1EQ5T753 118 aa2.55□□□□□ -2
NBN-202ENST00000396252 LCE1FQ5T754 118 aa2.55□□□□□ -2
NBN-202ENST00000396252 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
NBN-202ENST00000396252 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
NBN-202ENST00000396252 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
NBN-202ENST00000396252 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
NBN-202ENST00000396252 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
NBN-202ENST00000396252 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
NBN-202ENST00000396252 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
NBN-202ENST00000396252 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
NBN-202ENST00000396252 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
NBN-202ENST00000396252 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
NBN-202ENST00000396252 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
NBN-202ENST00000396252 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
NBN-202ENST00000396252 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
NBN-202ENST00000396252 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
NBN-202ENST00000396252 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
NBN-202ENST00000396252 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
NBN-202ENST00000396252 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
NBN-202ENST00000396252 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
NBN-202ENST00000396252 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
NBN-202ENST00000396252 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
NBN-202ENST00000396252 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
NBN-202ENST00000396252 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
NBN-202ENST00000396252 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
NBN-202ENST00000396252 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
NBN-202ENST00000396252 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 82.4 ms