RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
CCP110-202ENST00000396208 MT1EP04732 61 aa2.5□□□□□ -2.01
CCP110-202ENST00000396208 MT4P47944 62 aa2.48□□□□□ -2.01
CCP110-202ENST00000396208 UBR4Q5T4S7 5183 aa2.47□□□□□ -2.01
CCP110-202ENST00000396208 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
CCP110-202ENST00000396208 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
CCP110-202ENST00000396208 MT3P25713 68 aa2.46□□□□□ -2.02
CCP110-202ENST00000396208 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
CCP110-202ENST00000396208 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
CCP110-202ENST00000396208 MT1MQ8N339 61 aa2.44□□□□□ -2.02
CCP110-202ENST00000396208 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
CCP110-202ENST00000396208 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
CCP110-202ENST00000396208 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
CCP110-202ENST00000396208 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CCP110-202ENST00000396208 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.03
CCP110-202ENST00000396208 TNXBP22105 4242 aa2.34□□□□□ -2.03
CCP110-202ENST00000396208 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
CCP110-202ENST00000396208 MT1AP04731 61 aa2.3□□□□□ -2.04
CCP110-202ENST00000396208 LPAP08519 4548 aa2.26□□□□□ -2.05
CCP110-202ENST00000396208 LCE1DQ5T752 114 aa2.24□□□□□ -2.05
CCP110-202ENST00000396208 KRTAP19-7Q3SYF9 63 aa2.24□□□□□ -2.05
CCP110-202ENST00000396208 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
CCP110-202ENST00000396208 LCE5AQ5TCM9 118 aa2.21□□□□□ -2.06
CCP110-202ENST00000396208 KRTAP5-9P26371 169 aa2.19□□□□□ -2.06
CCP110-202ENST00000396208 KRTAP4-7Q9BYR0 210 aa2.18□□□□□ -2.06
CCP110-202ENST00000396208 NEBP20929 6669 aa2.18□□□□□ -2.06
CCP110-202ENST00000396208 FSIP2Q5CZC0 6907 aa2.18□□□□□ -2.06
CCP110-202ENST00000396208 KRTAP4-9Q9BYQ8 210 aa2.17□□□□□ -2.06
CCP110-202ENST00000396208 MUC2Q02817 5179 aa2.15□□□□□ -2.06
CCP110-202ENST00000396208 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
CCP110-202ENST00000396208 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
CCP110-202ENST00000396208 KRTAP9-4Q9BYQ2 154 aa2.11□□□□□ -2.07
CCP110-202ENST00000396208 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
CCP110-202ENST00000396208 SSPOA2VEC9 5147 aa2.08□□□□□ -2.08
CCP110-202ENST00000396208 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
CCP110-202ENST00000396208 LOC100996750A0A140TA64 210 aa2.07□□□□□ -2.08
CCP110-202ENST00000396208 USH2AO75445 5202 aa2.04□□□□□ -2.08
CCP110-202ENST00000396208 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
CCP110-202ENST00000396208 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
CCP110-202ENST00000396208 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
CCP110-202ENST00000396208 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
CCP110-202ENST00000396208 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
CCP110-202ENST00000396208 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
CCP110-202ENST00000396208 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
CCP110-202ENST00000396208 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
CCP110-202ENST00000396208 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.1
CCP110-202ENST00000396208 PRM1P04553 51 aa1.88□□□□□ -2.11
CCP110-202ENST00000396208 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
CCP110-202ENST00000396208 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
CCP110-202ENST00000396208 KMT2DO14686 5537 aa1.84□□□□□ -2.12
CCP110-202ENST00000396208 KRTAP4-6Q9BYQ5 205 aa1.82□□□□□ -2.12
CCP110-202ENST00000396208 KRTAP4-11Q9BYQ6 195 aa1.78□□□□□ -2.12
CCP110-202ENST00000396208 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
CCP110-202ENST00000396208 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
CCP110-202ENST00000396208 KRTAP5-3Q6L8H2 238 aa1.73□□□□□ -2.13
CCP110-202ENST00000396208 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
CCP110-202ENST00000396208 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
CCP110-202ENST00000396208 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
CCP110-202ENST00000396208 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
CCP110-202ENST00000396208 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
CCP110-202ENST00000396208 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
CCP110-202ENST00000396208 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
CCP110-202ENST00000396208 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
CCP110-202ENST00000396208 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
CCP110-202ENST00000396208 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
CCP110-202ENST00000396208 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
CCP110-202ENST00000396208 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
CCP110-202ENST00000396208 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
CCP110-202ENST00000396208 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
CCP110-202ENST00000396208 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
CCP110-202ENST00000396208 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
CCP110-202ENST00000396208 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
CCP110-202ENST00000396208 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
CCP110-202ENST00000396208 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.21
CCP110-202ENST00000396208 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
CCP110-202ENST00000396208 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
CCP110-202ENST00000396208 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 94.3 ms