RNA–Protein interactions for RNA: ENST00000395530.6

SPECC1-206, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 8,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-206ENST00000395530 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
SPECC1-206ENST00000395530 MT1MQ8N339 61 aa4.16□□□□□ -1.74
SPECC1-206ENST00000395530 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
SPECC1-206ENST00000395530 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
SPECC1-206ENST00000395530 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
SPECC1-206ENST00000395530 MT4P47944 62 aa4.07□□□□□ -1.76
SPECC1-206ENST00000395530 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
SPECC1-206ENST00000395530 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
SPECC1-206ENST00000395530 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
SPECC1-206ENST00000395530 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
SPECC1-206ENST00000395530 MT3P25713 68 aa3.99□□□□□ -1.77
SPECC1-206ENST00000395530 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
SPECC1-206ENST00000395530 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
SPECC1-206ENST00000395530 MUC2Q02817 5179 aa3.89□□□□□ -1.79
SPECC1-206ENST00000395530 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
SPECC1-206ENST00000395530 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
SPECC1-206ENST00000395530 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
SPECC1-206ENST00000395530 MT1AP04731 61 aa3.83□□□□□ -1.8
SPECC1-206ENST00000395530 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SPECC1-206ENST00000395530 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
SPECC1-206ENST00000395530 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
SPECC1-206ENST00000395530 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
SPECC1-206ENST00000395530 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
SPECC1-206ENST00000395530 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
SPECC1-206ENST00000395530 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
SPECC1-206ENST00000395530 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
SPECC1-206ENST00000395530 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
SPECC1-206ENST00000395530 PRM1P04553 51 aa3.68□□□□□ -1.82
SPECC1-206ENST00000395530 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
SPECC1-206ENST00000395530 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
SPECC1-206ENST00000395530 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
SPECC1-206ENST00000395530 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
SPECC1-206ENST00000395530 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SPECC1-206ENST00000395530 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
SPECC1-206ENST00000395530 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
SPECC1-206ENST00000395530 USH2AO75445 5202 aa3.54□□□□□ -1.84
SPECC1-206ENST00000395530 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
SPECC1-206ENST00000395530 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
SPECC1-206ENST00000395530 KMT2DO14686 5537 aa3.34□□□□□ -1.87
SPECC1-206ENST00000395530 KRTAP5-9P26371 169 aa3.34□□□□□ -1.88
SPECC1-206ENST00000395530 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
SPECC1-206ENST00000395530 NEBP20929 6669 aa3.29□□□□□ -1.88
SPECC1-206ENST00000395530 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
SPECC1-206ENST00000395530 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
SPECC1-206ENST00000395530 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
SPECC1-206ENST00000395530 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
SPECC1-206ENST00000395530 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SPECC1-206ENST00000395530 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SPECC1-206ENST00000395530 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
SPECC1-206ENST00000395530 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
SPECC1-206ENST00000395530 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
SPECC1-206ENST00000395530 MDN1Q9NU22 5596 aa3□□□□□ -1.93
SPECC1-206ENST00000395530 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
SPECC1-206ENST00000395530 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
SPECC1-206ENST00000395530 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
SPECC1-206ENST00000395530 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
SPECC1-206ENST00000395530 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
SPECC1-206ENST00000395530 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
SPECC1-206ENST00000395530 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SPECC1-206ENST00000395530 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
SPECC1-206ENST00000395530 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
SPECC1-206ENST00000395530 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
SPECC1-206ENST00000395530 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
SPECC1-206ENST00000395530 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
SPECC1-206ENST00000395530 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
SPECC1-206ENST00000395530 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
SPECC1-206ENST00000395530 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
SPECC1-206ENST00000395530 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
SPECC1-206ENST00000395530 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
SPECC1-206ENST00000395530 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
SPECC1-206ENST00000395530 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
SPECC1-206ENST00000395530 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
SPECC1-206ENST00000395530 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
SPECC1-206ENST00000395530 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SPECC1-206ENST00000395530 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
SPECC1-206ENST00000395530 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SPECC1-206ENST00000395530 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms