RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
PPP1CB-203ENST00000395366 KRTAP12-4P60329 112 aa4.84□□□□□ -1.64
PPP1CB-203ENST00000395366 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.64
PPP1CB-203ENST00000395366 SPRR2DP22532 72 aa4.81□□□□□ -1.64
PPP1CB-203ENST00000395366 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
PPP1CB-203ENST00000395366 MT1MQ8N339 61 aa4.77□□□□□ -1.65
PPP1CB-203ENST00000395366 USH2AO75445 5202 aa4.72□□□□□ -1.65
PPP1CB-203ENST00000395366 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
PPP1CB-203ENST00000395366 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
PPP1CB-203ENST00000395366 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
PPP1CB-203ENST00000395366 KMT2DO14686 5537 aa4.53□□□□□ -1.68
PPP1CB-203ENST00000395366 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
PPP1CB-203ENST00000395366 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
PPP1CB-203ENST00000395366 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
PPP1CB-203ENST00000395366 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
PPP1CB-203ENST00000395366 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
PPP1CB-203ENST00000395366 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
PPP1CB-203ENST00000395366 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
PPP1CB-203ENST00000395366 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
PPP1CB-203ENST00000395366 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.7
PPP1CB-203ENST00000395366 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
PPP1CB-203ENST00000395366 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
PPP1CB-203ENST00000395366 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
PPP1CB-203ENST00000395366 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
PPP1CB-203ENST00000395366 MT1AP04731 61 aa4.34□□□□□ -1.71
PPP1CB-203ENST00000395366 PRM1P04553 51 aa4.34□□□□□ -1.71
PPP1CB-203ENST00000395366 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
PPP1CB-203ENST00000395366 MT3P25713 68 aa4.3□□□□□ -1.72
PPP1CB-203ENST00000395366 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
PPP1CB-203ENST00000395366 MT4P47944 62 aa4.26□□□□□ -1.73
PPP1CB-203ENST00000395366 MACF1Q9UPN3 7388 aaKnown RBP4.26□□□□□ -1.73
PPP1CB-203ENST00000395366 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
PPP1CB-203ENST00000395366 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
PPP1CB-203ENST00000395366 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
PPP1CB-203ENST00000395366 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
PPP1CB-203ENST00000395366 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
PPP1CB-203ENST00000395366 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
PPP1CB-203ENST00000395366 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
PPP1CB-203ENST00000395366 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
PPP1CB-203ENST00000395366 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
PPP1CB-203ENST00000395366 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
PPP1CB-203ENST00000395366 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
PPP1CB-203ENST00000395366 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
PPP1CB-203ENST00000395366 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
PPP1CB-203ENST00000395366 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
PPP1CB-203ENST00000395366 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
PPP1CB-203ENST00000395366 NEBP20929 6669 aa3.73□□□□□ -1.81
PPP1CB-203ENST00000395366 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
PPP1CB-203ENST00000395366 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
PPP1CB-203ENST00000395366 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
PPP1CB-203ENST00000395366 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
PPP1CB-203ENST00000395366 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
PPP1CB-203ENST00000395366 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
PPP1CB-203ENST00000395366 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
PPP1CB-203ENST00000395366 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
PPP1CB-203ENST00000395366 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
PPP1CB-203ENST00000395366 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PPP1CB-203ENST00000395366 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
PPP1CB-203ENST00000395366 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
PPP1CB-203ENST00000395366 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
PPP1CB-203ENST00000395366 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
PPP1CB-203ENST00000395366 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
PPP1CB-203ENST00000395366 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
PPP1CB-203ENST00000395366 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
PPP1CB-203ENST00000395366 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
PPP1CB-203ENST00000395366 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
PPP1CB-203ENST00000395366 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.98
PPP1CB-203ENST00000395366 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
PPP1CB-203ENST00000395366 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
PPP1CB-203ENST00000395366 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.02
PPP1CB-203ENST00000395366 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
PPP1CB-203ENST00000395366 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
PPP1CB-203ENST00000395366 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
PPP1CB-203ENST00000395366 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
PPP1CB-203ENST00000395366 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
PPP1CB-203ENST00000395366 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
PPP1CB-203ENST00000395366 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms