RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
TFRC-202ENST00000392396 MT3P25713 68 aa5.77□□□□□ -1.49
TFRC-202ENST00000392396 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
TFRC-202ENST00000392396 LPAP08519 4548 aa5.74□□□□□ -1.49
TFRC-202ENST00000392396 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
TFRC-202ENST00000392396 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
TFRC-202ENST00000392396 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
TFRC-202ENST00000392396 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
TFRC-202ENST00000392396 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
TFRC-202ENST00000392396 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.51
TFRC-202ENST00000392396 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.51
TFRC-202ENST00000392396 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
TFRC-202ENST00000392396 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
TFRC-202ENST00000392396 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
TFRC-202ENST00000392396 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
TFRC-202ENST00000392396 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
TFRC-202ENST00000392396 TNXBP22105 4242 aa5.56□□□□□ -1.52
TFRC-202ENST00000392396 HMCN2Q8NDA2 5059 aa5.49□□□□□ -1.53
TFRC-202ENST00000392396 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
TFRC-202ENST00000392396 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
TFRC-202ENST00000392396 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
TFRC-202ENST00000392396 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
TFRC-202ENST00000392396 MUC2Q02817 5179 aa5.42□□□□□ -1.54
TFRC-202ENST00000392396 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
TFRC-202ENST00000392396 MT1AP04731 61 aa5.41□□□□□ -1.54
TFRC-202ENST00000392396 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
TFRC-202ENST00000392396 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
TFRC-202ENST00000392396 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
TFRC-202ENST00000392396 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
TFRC-202ENST00000392396 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
TFRC-202ENST00000392396 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
TFRC-202ENST00000392396 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
TFRC-202ENST00000392396 PRM1P04553 51 aa4.96□□□□□ -1.61
TFRC-202ENST00000392396 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
TFRC-202ENST00000392396 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
TFRC-202ENST00000392396 NEBP20929 6669 aa4.83□□□□□ -1.64
TFRC-202ENST00000392396 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
TFRC-202ENST00000392396 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
TFRC-202ENST00000392396 USH2AO75445 5202 aa4.74□□□□□ -1.65
TFRC-202ENST00000392396 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
TFRC-202ENST00000392396 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
TFRC-202ENST00000392396 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
TFRC-202ENST00000392396 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
TFRC-202ENST00000392396 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
TFRC-202ENST00000392396 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
TFRC-202ENST00000392396 KMT2DO14686 5537 aa4.62□□□□□ -1.67
TFRC-202ENST00000392396 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
TFRC-202ENST00000392396 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
TFRC-202ENST00000392396 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
TFRC-202ENST00000392396 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
TFRC-202ENST00000392396 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
TFRC-202ENST00000392396 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
TFRC-202ENST00000392396 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.74
TFRC-202ENST00000392396 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
TFRC-202ENST00000392396 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
TFRC-202ENST00000392396 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
TFRC-202ENST00000392396 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
TFRC-202ENST00000392396 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
TFRC-202ENST00000392396 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
TFRC-202ENST00000392396 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
TFRC-202ENST00000392396 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
TFRC-202ENST00000392396 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
TFRC-202ENST00000392396 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
TFRC-202ENST00000392396 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
TFRC-202ENST00000392396 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
TFRC-202ENST00000392396 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
TFRC-202ENST00000392396 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
TFRC-202ENST00000392396 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
TFRC-202ENST00000392396 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
TFRC-202ENST00000392396 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
TFRC-202ENST00000392396 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
TFRC-202ENST00000392396 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
TFRC-202ENST00000392396 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
TFRC-202ENST00000392396 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
TFRC-202ENST00000392396 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
TFRC-202ENST00000392396 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
TFRC-202ENST00000392396 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms