RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
ZNF541-203ENST00000391901 SPRR2DP22532 72 aa4.76□□□□□ -1.65
ZNF541-203ENST00000391901 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
ZNF541-203ENST00000391901 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
ZNF541-203ENST00000391901 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
ZNF541-203ENST00000391901 MT1MQ8N339 61 aa4.62□□□□□ -1.67
ZNF541-203ENST00000391901 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
ZNF541-203ENST00000391901 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
ZNF541-203ENST00000391901 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
ZNF541-203ENST00000391901 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
ZNF541-203ENST00000391901 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
ZNF541-203ENST00000391901 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
ZNF541-203ENST00000391901 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
ZNF541-203ENST00000391901 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
ZNF541-203ENST00000391901 USH2AO75445 5202 aa4.4□□□□□ -1.7
ZNF541-203ENST00000391901 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.7
ZNF541-203ENST00000391901 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.7
ZNF541-203ENST00000391901 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.7
ZNF541-203ENST00000391901 PRM1P04553 51 aa4.37□□□□□ -1.71
ZNF541-203ENST00000391901 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
ZNF541-203ENST00000391901 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
ZNF541-203ENST00000391901 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
ZNF541-203ENST00000391901 MT3P25713 68 aa4.29□□□□□ -1.72
ZNF541-203ENST00000391901 KMT2DO14686 5537 aa4.29□□□□□ -1.72
ZNF541-203ENST00000391901 MT4P47944 62 aa4.28□□□□□ -1.73
ZNF541-203ENST00000391901 MT1AP04731 61 aa4.22□□□□□ -1.73
ZNF541-203ENST00000391901 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
ZNF541-203ENST00000391901 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.75
ZNF541-203ENST00000391901 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
ZNF541-203ENST00000391901 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
ZNF541-203ENST00000391901 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
ZNF541-203ENST00000391901 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
ZNF541-203ENST00000391901 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
ZNF541-203ENST00000391901 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
ZNF541-203ENST00000391901 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
ZNF541-203ENST00000391901 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
ZNF541-203ENST00000391901 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
ZNF541-203ENST00000391901 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
ZNF541-203ENST00000391901 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
ZNF541-203ENST00000391901 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
ZNF541-203ENST00000391901 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
ZNF541-203ENST00000391901 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
ZNF541-203ENST00000391901 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
ZNF541-203ENST00000391901 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
ZNF541-203ENST00000391901 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
ZNF541-203ENST00000391901 NEBP20929 6669 aa3.58□□□□□ -1.84
ZNF541-203ENST00000391901 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
ZNF541-203ENST00000391901 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
ZNF541-203ENST00000391901 LCE1EQ5T753 118 aa3.46□□□□□ -1.85
ZNF541-203ENST00000391901 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
ZNF541-203ENST00000391901 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
ZNF541-203ENST00000391901 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
ZNF541-203ENST00000391901 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
ZNF541-203ENST00000391901 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
ZNF541-203ENST00000391901 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
ZNF541-203ENST00000391901 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
ZNF541-203ENST00000391901 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
ZNF541-203ENST00000391901 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
ZNF541-203ENST00000391901 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
ZNF541-203ENST00000391901 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
ZNF541-203ENST00000391901 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
ZNF541-203ENST00000391901 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
ZNF541-203ENST00000391901 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
ZNF541-203ENST00000391901 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
ZNF541-203ENST00000391901 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
ZNF541-203ENST00000391901 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
ZNF541-203ENST00000391901 KRTAP5-8O75690 187 aa2.55□□□□□ -2
ZNF541-203ENST00000391901 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.04
ZNF541-203ENST00000391901 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
ZNF541-203ENST00000391901 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
ZNF541-203ENST00000391901 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
ZNF541-203ENST00000391901 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
ZNF541-203ENST00000391901 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
ZNF541-203ENST00000391901 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
ZNF541-203ENST00000391901 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
ZNF541-203ENST00000391901 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
ZNF541-203ENST00000391901 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 112 ms