RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.87
PKP4-201ENST00000389757 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
PKP4-201ENST00000389757 MT1MQ8N339 61 aa3.31□□□□□ -1.88
PKP4-201ENST00000389757 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
PKP4-201ENST00000389757 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
PKP4-201ENST00000389757 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
PKP4-201ENST00000389757 MT4P47944 62 aa3.24□□□□□ -1.89
PKP4-201ENST00000389757 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
PKP4-201ENST00000389757 MT3P25713 68 aa3.19□□□□□ -1.9
PKP4-201ENST00000389757 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
PKP4-201ENST00000389757 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
PKP4-201ENST00000389757 KRTAP9-7A8MTY7 169 aa3.16□□□□□ -1.9
PKP4-201ENST00000389757 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.91
PKP4-201ENST00000389757 MUC2Q02817 5179 aa3.13□□□□□ -1.91
PKP4-201ENST00000389757 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
PKP4-201ENST00000389757 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
PKP4-201ENST00000389757 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
PKP4-201ENST00000389757 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
PKP4-201ENST00000389757 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
PKP4-201ENST00000389757 MT1AP04731 61 aa3.06□□□□□ -1.92
PKP4-201ENST00000389757 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
PKP4-201ENST00000389757 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
PKP4-201ENST00000389757 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
PKP4-201ENST00000389757 LCE1DQ5T752 114 aa3□□□□□ -1.93
PKP4-201ENST00000389757 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
PKP4-201ENST00000389757 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
PKP4-201ENST00000389757 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
PKP4-201ENST00000389757 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
PKP4-201ENST00000389757 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
PKP4-201ENST00000389757 PRM1P04553 51 aa2.88□□□□□ -1.95
PKP4-201ENST00000389757 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
PKP4-201ENST00000389757 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
PKP4-201ENST00000389757 USH2AO75445 5202 aa2.84□□□□□ -1.95
PKP4-201ENST00000389757 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
PKP4-201ENST00000389757 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
PKP4-201ENST00000389757 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
PKP4-201ENST00000389757 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
PKP4-201ENST00000389757 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
PKP4-201ENST00000389757 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
PKP4-201ENST00000389757 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.99
PKP4-201ENST00000389757 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
PKP4-201ENST00000389757 NEBP20929 6669 aa2.63□□□□□ -1.99
PKP4-201ENST00000389757 KMT2DO14686 5537 aa2.62□□□□□ -1.99
PKP4-201ENST00000389757 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
PKP4-201ENST00000389757 LCE1CQ5T751 118 aa2.53□□□□□ -2
PKP4-201ENST00000389757 LCE1EQ5T753 118 aa2.53□□□□□ -2
PKP4-201ENST00000389757 LCE1FQ5T754 118 aa2.53□□□□□ -2
PKP4-201ENST00000389757 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
PKP4-201ENST00000389757 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
PKP4-201ENST00000389757 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
PKP4-201ENST00000389757 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
PKP4-201ENST00000389757 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
PKP4-201ENST00000389757 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
PKP4-201ENST00000389757 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
PKP4-201ENST00000389757 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
PKP4-201ENST00000389757 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
PKP4-201ENST00000389757 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
PKP4-201ENST00000389757 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
PKP4-201ENST00000389757 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
PKP4-201ENST00000389757 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
PKP4-201ENST00000389757 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
PKP4-201ENST00000389757 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
PKP4-201ENST00000389757 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
PKP4-201ENST00000389757 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
PKP4-201ENST00000389757 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
PKP4-201ENST00000389757 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.12
PKP4-201ENST00000389757 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
PKP4-201ENST00000389757 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
PKP4-201ENST00000389757 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
PKP4-201ENST00000389757 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
PKP4-201ENST00000389757 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
PKP4-201ENST00000389757 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
PKP4-201ENST00000389757 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
PKP4-201ENST00000389757 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
PKP4-201ENST00000389757 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
PKP4-201ENST00000389757 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
PKP4-201ENST00000389757 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 75.2 ms