RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
KIF3A-202ENST00000378746 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
KIF3A-202ENST00000378746 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
KIF3A-202ENST00000378746 LCE2DQ5TA82 110 aaPredicted RBP4.62□□□□□ -1.67
KIF3A-202ENST00000378746 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
KIF3A-202ENST00000378746 MT1AP04731 61 aa4.61□□□□□ -1.67
KIF3A-202ENST00000378746 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
KIF3A-202ENST00000378746 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
KIF3A-202ENST00000378746 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
KIF3A-202ENST00000378746 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
KIF3A-202ENST00000378746 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
KIF3A-202ENST00000378746 MT4P47944 62 aa4.4□□□□□ -1.7
KIF3A-202ENST00000378746 RNF213Q63HN8 5207 aa4.4□□□□□ -1.71
KIF3A-202ENST00000378746 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
KIF3A-202ENST00000378746 FAT4Q6V0I7 4981 aa4.37□□□□□ -1.71
KIF3A-202ENST00000378746 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
KIF3A-202ENST00000378746 UBR4Q5T4S7 5183 aa4.34□□□□□ -1.71
KIF3A-202ENST00000378746 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
KIF3A-202ENST00000378746 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
KIF3A-202ENST00000378746 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
KIF3A-202ENST00000378746 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
KIF3A-202ENST00000378746 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
KIF3A-202ENST00000378746 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
KIF3A-202ENST00000378746 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
KIF3A-202ENST00000378746 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
KIF3A-202ENST00000378746 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
KIF3A-202ENST00000378746 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
KIF3A-202ENST00000378746 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
KIF3A-202ENST00000378746 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
KIF3A-202ENST00000378746 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
KIF3A-202ENST00000378746 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
KIF3A-202ENST00000378746 MUC2Q02817 5179 aa3.94□□□□□ -1.78
KIF3A-202ENST00000378746 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
KIF3A-202ENST00000378746 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
KIF3A-202ENST00000378746 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
KIF3A-202ENST00000378746 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
KIF3A-202ENST00000378746 USH2AO75445 5202 aa3.62□□□□□ -1.83
KIF3A-202ENST00000378746 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
KIF3A-202ENST00000378746 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
KIF3A-202ENST00000378746 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
KIF3A-202ENST00000378746 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
KIF3A-202ENST00000378746 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
KIF3A-202ENST00000378746 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
KIF3A-202ENST00000378746 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
KIF3A-202ENST00000378746 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
KIF3A-202ENST00000378746 KMT2DO14686 5537 aa3.36□□□□□ -1.87
KIF3A-202ENST00000378746 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
KIF3A-202ENST00000378746 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
KIF3A-202ENST00000378746 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
KIF3A-202ENST00000378746 NEBP20929 6669 aa3.33□□□□□ -1.88
KIF3A-202ENST00000378746 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
KIF3A-202ENST00000378746 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
KIF3A-202ENST00000378746 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
KIF3A-202ENST00000378746 MDN1Q9NU22 5596 aa3.15□□□□□ -1.9
KIF3A-202ENST00000378746 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
KIF3A-202ENST00000378746 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
KIF3A-202ENST00000378746 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
KIF3A-202ENST00000378746 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
KIF3A-202ENST00000378746 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
KIF3A-202ENST00000378746 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
KIF3A-202ENST00000378746 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
KIF3A-202ENST00000378746 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
KIF3A-202ENST00000378746 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
KIF3A-202ENST00000378746 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
KIF3A-202ENST00000378746 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
KIF3A-202ENST00000378746 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
KIF3A-202ENST00000378746 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
KIF3A-202ENST00000378746 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
KIF3A-202ENST00000378746 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
KIF3A-202ENST00000378746 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
KIF3A-202ENST00000378746 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
KIF3A-202ENST00000378746 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
KIF3A-202ENST00000378746 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
KIF3A-202ENST00000378746 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
KIF3A-202ENST00000378746 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
KIF3A-202ENST00000378746 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
KIF3A-202ENST00000378746 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 86 ms