RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
SKI-201ENST00000378536 KRTAP4-7Q9BYR0 210 aa7□□□□□ -1.29
SKI-201ENST00000378536 FSIP2Q5CZC0 6907 aa6.92□□□□□ -1.3
SKI-201ENST00000378536 MT1MQ8N339 61 aa6.89□□□□□ -1.31
SKI-201ENST00000378536 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
SKI-201ENST00000378536 MUC2Q02817 5179 aa6.87□□□□□ -1.31
SKI-201ENST00000378536 KRTAP19-7Q3SYF9 63 aa6.76□□□□□ -1.33
SKI-201ENST00000378536 KRTAP4-3Q9BYR4 195 aa6.65□□□□□ -1.34
SKI-201ENST00000378536 LCE3DQ9BYE3 92 aa6.63□□□□□ -1.35
SKI-201ENST00000378536 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
SKI-201ENST00000378536 MT4P47944 62 aa6.5□□□□□ -1.37
SKI-201ENST00000378536 LCE3EQ5T5B0 92 aa6.49□□□□□ -1.37
SKI-201ENST00000378536 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.38
SKI-201ENST00000378536 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
SKI-201ENST00000378536 MT3P25713 68 aa6.42□□□□□ -1.38
SKI-201ENST00000378536 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
SKI-201ENST00000378536 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
SKI-201ENST00000378536 MT1AP04731 61 aa6.31□□□□□ -1.4
SKI-201ENST00000378536 USH2AO75445 5202 aa6.26□□□□□ -1.41
SKI-201ENST00000378536 KRTAP20-1Q3LI63 56 aa6.25□□□□□ -1.41
SKI-201ENST00000378536 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
SKI-201ENST00000378536 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
SKI-201ENST00000378536 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
SKI-201ENST00000378536 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
SKI-201ENST00000378536 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.43
SKI-201ENST00000378536 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
SKI-201ENST00000378536 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
SKI-201ENST00000378536 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.45
SKI-201ENST00000378536 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
SKI-201ENST00000378536 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
SKI-201ENST00000378536 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
SKI-201ENST00000378536 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
SKI-201ENST00000378536 LCE1BQ5T7P3 118 aa5.9□□□□□ -1.47
SKI-201ENST00000378536 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
SKI-201ENST00000378536 PRM1P04553 51 aa5.83□□□□□ -1.48
SKI-201ENST00000378536 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
SKI-201ENST00000378536 MACF1Q9UPN3 7388 aaKnown RBP5.8□□□□□ -1.48
SKI-201ENST00000378536 KMT2DO14686 5537 aa5.79□□□□□ -1.48
SKI-201ENST00000378536 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
SKI-201ENST00000378536 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
SKI-201ENST00000378536 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
SKI-201ENST00000378536 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
SKI-201ENST00000378536 NEBP20929 6669 aa5.47□□□□□ -1.53
SKI-201ENST00000378536 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
SKI-201ENST00000378536 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
SKI-201ENST00000378536 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
SKI-201ENST00000378536 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
SKI-201ENST00000378536 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
SKI-201ENST00000378536 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
SKI-201ENST00000378536 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
SKI-201ENST00000378536 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
SKI-201ENST00000378536 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
SKI-201ENST00000378536 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
SKI-201ENST00000378536 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
SKI-201ENST00000378536 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SKI-201ENST00000378536 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
SKI-201ENST00000378536 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
SKI-201ENST00000378536 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
SKI-201ENST00000378536 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
SKI-201ENST00000378536 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
SKI-201ENST00000378536 MUC19Q7Z5P9 8384 aa4.1□□□□□ -1.75
SKI-201ENST00000378536 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
SKI-201ENST00000378536 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
SKI-201ENST00000378536 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
SKI-201ENST00000378536 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
SKI-201ENST00000378536 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
SKI-201ENST00000378536 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
SKI-201ENST00000378536 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
SKI-201ENST00000378536 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
SKI-201ENST00000378536 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
SKI-201ENST00000378536 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
SKI-201ENST00000378536 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
SKI-201ENST00000378536 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
SKI-201ENST00000378536 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
SKI-201ENST00000378536 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
SKI-201ENST00000378536 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
SKI-201ENST00000378536 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms