RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 MT1EP04732 61 aa4.95□□□□□ -1.62
NPHP4-201ENST00000378156 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
NPHP4-201ENST00000378156 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
NPHP4-201ENST00000378156 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
NPHP4-201ENST00000378156 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
NPHP4-201ENST00000378156 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
NPHP4-201ENST00000378156 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
NPHP4-201ENST00000378156 MT1MQ8N339 61 aa4.78□□□□□ -1.64
NPHP4-201ENST00000378156 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
NPHP4-201ENST00000378156 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
NPHP4-201ENST00000378156 LCE2DQ5TA82 110 aaPredicted RBP4.73□□□□□ -1.65
NPHP4-201ENST00000378156 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
NPHP4-201ENST00000378156 MT3P25713 68 aa4.55□□□□□ -1.68
NPHP4-201ENST00000378156 PRM1P04553 51 aa4.53□□□□□ -1.68
NPHP4-201ENST00000378156 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
NPHP4-201ENST00000378156 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
NPHP4-201ENST00000378156 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
NPHP4-201ENST00000378156 MT4P47944 62 aa4.5□□□□□ -1.69
NPHP4-201ENST00000378156 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
NPHP4-201ENST00000378156 USH2AO75445 5202 aa4.48□□□□□ -1.69
NPHP4-201ENST00000378156 KMT2DO14686 5537 aa4.45□□□□□ -1.7
NPHP4-201ENST00000378156 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
NPHP4-201ENST00000378156 MT1AP04731 61 aa4.41□□□□□ -1.7
NPHP4-201ENST00000378156 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
NPHP4-201ENST00000378156 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
NPHP4-201ENST00000378156 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
NPHP4-201ENST00000378156 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
NPHP4-201ENST00000378156 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
NPHP4-201ENST00000378156 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
NPHP4-201ENST00000378156 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
NPHP4-201ENST00000378156 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
NPHP4-201ENST00000378156 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
NPHP4-201ENST00000378156 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
NPHP4-201ENST00000378156 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
NPHP4-201ENST00000378156 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
NPHP4-201ENST00000378156 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.74
NPHP4-201ENST00000378156 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
NPHP4-201ENST00000378156 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
NPHP4-201ENST00000378156 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
NPHP4-201ENST00000378156 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
NPHP4-201ENST00000378156 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
NPHP4-201ENST00000378156 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
NPHP4-201ENST00000378156 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
NPHP4-201ENST00000378156 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
NPHP4-201ENST00000378156 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
NPHP4-201ENST00000378156 NEBP20929 6669 aa3.66□□□□□ -1.82
NPHP4-201ENST00000378156 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
NPHP4-201ENST00000378156 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
NPHP4-201ENST00000378156 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
NPHP4-201ENST00000378156 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
NPHP4-201ENST00000378156 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
NPHP4-201ENST00000378156 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
NPHP4-201ENST00000378156 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
NPHP4-201ENST00000378156 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
NPHP4-201ENST00000378156 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
NPHP4-201ENST00000378156 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
NPHP4-201ENST00000378156 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
NPHP4-201ENST00000378156 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
NPHP4-201ENST00000378156 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
NPHP4-201ENST00000378156 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
NPHP4-201ENST00000378156 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
NPHP4-201ENST00000378156 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
NPHP4-201ENST00000378156 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
NPHP4-201ENST00000378156 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
NPHP4-201ENST00000378156 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
NPHP4-201ENST00000378156 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
NPHP4-201ENST00000378156 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
NPHP4-201ENST00000378156 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
NPHP4-201ENST00000378156 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
NPHP4-201ENST00000378156 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
NPHP4-201ENST00000378156 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
NPHP4-201ENST00000378156 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
NPHP4-201ENST00000378156 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
NPHP4-201ENST00000378156 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
NPHP4-201ENST00000378156 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
NPHP4-201ENST00000378156 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
NPHP4-201ENST00000378156 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 110.6 ms