RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 KRTAP17-1Q9BYP8 105 aa2.59□□□□□ -2
CSMD2-205ENST00000373381 LOC100996750A0A140TA64 210 aa2.57□□□□□ -2
CSMD2-205ENST00000373381 PCLOQ9Y6V0 5065 aa2.57□□□□□ -2
CSMD2-205ENST00000373381 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
CSMD2-205ENST00000373381 LCE4AQ5TA78 99 aa2.56□□□□□ -2
CSMD2-205ENST00000373381 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
CSMD2-205ENST00000373381 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
CSMD2-205ENST00000373381 HERC2O95714 4834 aa2.5□□□□□ -2.01
CSMD2-205ENST00000373381 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
CSMD2-205ENST00000373381 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
CSMD2-205ENST00000373381 BIRC6Q9NR09 4857 aa2.45□□□□□ -2.02
CSMD2-205ENST00000373381 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
CSMD2-205ENST00000373381 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
CSMD2-205ENST00000373381 KRTAP4-9Q9BYQ8 210 aa2.42□□□□□ -2.02
CSMD2-205ENST00000373381 EPPK1P58107 5090 aaKnown RBP2.41□□□□□ -2.02
CSMD2-205ENST00000373381 LRP2P98164 4655 aa2.39□□□□□ -2.03
CSMD2-205ENST00000373381 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
CSMD2-205ENST00000373381 HYDINQ4G0P3 5121 aa2.37□□□□□ -2.03
CSMD2-205ENST00000373381 HERC1Q15751 4861 aa2.37□□□□□ -2.03
CSMD2-205ENST00000373381 MUC17Q685J3 4493 aa2.37□□□□□ -2.03
CSMD2-205ENST00000373381 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
CSMD2-205ENST00000373381 RYR2Q92736 4967 aa2.36□□□□□ -2.03
CSMD2-205ENST00000373381 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.33□□□□□ -2.04
CSMD2-205ENST00000373381 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
CSMD2-205ENST00000373381 LPAP08519 4548 aa2.29□□□□□ -2.04
CSMD2-205ENST00000373381 KMT2CQ8NEZ4 4911 aaKnown RBP2.28□□□□□ -2.04
CSMD2-205ENST00000373381 KRTAP19-7Q3SYF9 63 aa2.27□□□□□ -2.05
CSMD2-205ENST00000373381 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
CSMD2-205ENST00000373381 KIAA1109Q2LD37 5005 aa2.26□□□□□ -2.05
CSMD2-205ENST00000373381 ABCA13Q86UQ4 5058 aa2.25□□□□□ -2.05
CSMD2-205ENST00000373381 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
CSMD2-205ENST00000373381 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
CSMD2-205ENST00000373381 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
CSMD2-205ENST00000373381 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
CSMD2-205ENST00000373381 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
CSMD2-205ENST00000373381 MUC2Q02817 5179 aa2.08□□□□□ -2.08
CSMD2-205ENST00000373381 FSIP2Q5CZC0 6907 aa2.02□□□□□ -2.09
CSMD2-205ENST00000373381 KRTAP4-11Q9BYQ6 195 aa1.99□□□□□ -2.09
CSMD2-205ENST00000373381 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
CSMD2-205ENST00000373381 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
CSMD2-205ENST00000373381 FAT4Q6V0I7 4981 aa1.93□□□□□ -2.1
CSMD2-205ENST00000373381 KRTAP9-6A8MVA2 160 aa1.93□□□□□ -2.1
CSMD2-205ENST00000373381 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CSMD2-205ENST00000373381 USH2AO75445 5202 aa1.91□□□□□ -2.1
CSMD2-205ENST00000373381 KRTAP4-6Q9BYQ5 205 aa1.9□□□□□ -2.11
CSMD2-205ENST00000373381 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.11
CSMD2-205ENST00000373381 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
CSMD2-205ENST00000373381 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
CSMD2-205ENST00000373381 KMT2DO14686 5537 aa1.84□□□□□ -2.11
CSMD2-205ENST00000373381 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
CSMD2-205ENST00000373381 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
CSMD2-205ENST00000373381 KRTAP5-4Q6L8H1 288 aa1.79□□□□□ -2.12
CSMD2-205ENST00000373381 KRTAP5-9P26371 169 aa1.79□□□□□ -2.12
CSMD2-205ENST00000373381 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
CSMD2-205ENST00000373381 NEBP20929 6669 aa1.72□□□□□ -2.13
CSMD2-205ENST00000373381 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
CSMD2-205ENST00000373381 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
CSMD2-205ENST00000373381 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
CSMD2-205ENST00000373381 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
CSMD2-205ENST00000373381 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
CSMD2-205ENST00000373381 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
CSMD2-205ENST00000373381 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
CSMD2-205ENST00000373381 KRTAP5-3Q6L8H2 238 aa1.55□□□□□ -2.16
CSMD2-205ENST00000373381 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
CSMD2-205ENST00000373381 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
CSMD2-205ENST00000373381 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.17
CSMD2-205ENST00000373381 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
CSMD2-205ENST00000373381 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
CSMD2-205ENST00000373381 KRTAP5-11Q6L8G4 156 aa1.19□□□□□ -2.22
CSMD2-205ENST00000373381 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
CSMD2-205ENST00000373381 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CSMD2-205ENST00000373381 KRTAP5-2Q701N4 177 aa1.16□□□□□ -2.22
CSMD2-205ENST00000373381 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
CSMD2-205ENST00000373381 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
CSMD2-205ENST00000373381 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
CSMD2-205ENST00000373381 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.97□□□□□ -2.25
CSMD2-205ENST00000373381 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 148.6 ms