RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
CHST3-201ENST00000373115 HERC1Q15751 4861 aa4.46□□□□□ -1.69
CHST3-201ENST00000373115 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
CHST3-201ENST00000373115 HERC2O95714 4834 aa4.43□□□□□ -1.7
CHST3-201ENST00000373115 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
CHST3-201ENST00000373115 HYDINQ4G0P3 5121 aa4.42□□□□□ -1.7
CHST3-201ENST00000373115 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.7
CHST3-201ENST00000373115 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.7
CHST3-201ENST00000373115 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.7
CHST3-201ENST00000373115 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.7
CHST3-201ENST00000373115 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
CHST3-201ENST00000373115 MT1AP04731 61 aa4.37□□□□□ -1.71
CHST3-201ENST00000373115 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
CHST3-201ENST00000373115 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
CHST3-201ENST00000373115 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
CHST3-201ENST00000373115 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
CHST3-201ENST00000373115 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
CHST3-201ENST00000373115 ABCA13Q86UQ4 5058 aa4.26□□□□□ -1.73
CHST3-201ENST00000373115 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
CHST3-201ENST00000373115 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
CHST3-201ENST00000373115 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
CHST3-201ENST00000373115 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
CHST3-201ENST00000373115 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
CHST3-201ENST00000373115 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
CHST3-201ENST00000373115 EPPK1P58107 5090 aaKnown RBP4.16□□□□□ -1.74
CHST3-201ENST00000373115 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
CHST3-201ENST00000373115 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
CHST3-201ENST00000373115 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
CHST3-201ENST00000373115 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
CHST3-201ENST00000373115 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
CHST3-201ENST00000373115 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
CHST3-201ENST00000373115 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
CHST3-201ENST00000373115 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.77
CHST3-201ENST00000373115 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
CHST3-201ENST00000373115 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
CHST3-201ENST00000373115 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
CHST3-201ENST00000373115 MUC2Q02817 5179 aa3.85□□□□□ -1.79
CHST3-201ENST00000373115 FAT4Q6V0I7 4981 aa3.74□□□□□ -1.81
CHST3-201ENST00000373115 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
CHST3-201ENST00000373115 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
CHST3-201ENST00000373115 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
CHST3-201ENST00000373115 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
CHST3-201ENST00000373115 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
CHST3-201ENST00000373115 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
CHST3-201ENST00000373115 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
CHST3-201ENST00000373115 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
CHST3-201ENST00000373115 USH2AO75445 5202 aa3.37□□□□□ -1.87
CHST3-201ENST00000373115 KMT2DO14686 5537 aa3.34□□□□□ -1.87
CHST3-201ENST00000373115 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
CHST3-201ENST00000373115 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
CHST3-201ENST00000373115 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
CHST3-201ENST00000373115 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
CHST3-201ENST00000373115 NEBP20929 6669 aa3.21□□□□□ -1.89
CHST3-201ENST00000373115 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
CHST3-201ENST00000373115 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
CHST3-201ENST00000373115 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CHST3-201ENST00000373115 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
CHST3-201ENST00000373115 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
CHST3-201ENST00000373115 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
CHST3-201ENST00000373115 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
CHST3-201ENST00000373115 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
CHST3-201ENST00000373115 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CHST3-201ENST00000373115 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
CHST3-201ENST00000373115 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
CHST3-201ENST00000373115 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
CHST3-201ENST00000373115 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.04
CHST3-201ENST00000373115 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
CHST3-201ENST00000373115 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
CHST3-201ENST00000373115 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
CHST3-201ENST00000373115 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
CHST3-201ENST00000373115 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
CHST3-201ENST00000373115 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
CHST3-201ENST00000373115 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
CHST3-201ENST00000373115 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CHST3-201ENST00000373115 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
CHST3-201ENST00000373115 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
CHST3-201ENST00000373115 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms