RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
UBR2-201ENST00000372899 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
UBR2-201ENST00000372899 TNXBP22105 4242 aa4.28□□□□□ -1.73
UBR2-201ENST00000372899 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
UBR2-201ENST00000372899 HERC2O95714 4834 aa4.21□□□□□ -1.74
UBR2-201ENST00000372899 LPAP08519 4548 aa4.15□□□□□ -1.75
UBR2-201ENST00000372899 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
UBR2-201ENST00000372899 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
UBR2-201ENST00000372899 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
UBR2-201ENST00000372899 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
UBR2-201ENST00000372899 MT1AP04731 61 aa4.05□□□□□ -1.76
UBR2-201ENST00000372899 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
UBR2-201ENST00000372899 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
UBR2-201ENST00000372899 BIRC6Q9NR09 4857 aa3.99□□□□□ -1.77
UBR2-201ENST00000372899 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
UBR2-201ENST00000372899 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
UBR2-201ENST00000372899 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.78
UBR2-201ENST00000372899 EPPK1P58107 5090 aaKnown RBP3.93□□□□□ -1.78
UBR2-201ENST00000372899 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
UBR2-201ENST00000372899 HERC1Q15751 4861 aa3.91□□□□□ -1.78
UBR2-201ENST00000372899 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.78
UBR2-201ENST00000372899 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.78
UBR2-201ENST00000372899 MUC17Q685J3 4493 aa3.89□□□□□ -1.79
UBR2-201ENST00000372899 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
UBR2-201ENST00000372899 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
UBR2-201ENST00000372899 ABCA13Q86UQ4 5058 aa3.83□□□□□ -1.8
UBR2-201ENST00000372899 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
UBR2-201ENST00000372899 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
UBR2-201ENST00000372899 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
UBR2-201ENST00000372899 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
UBR2-201ENST00000372899 MUC2Q02817 5179 aa3.69□□□□□ -1.82
UBR2-201ENST00000372899 LCE2AQ5TA79 106 aaPredicted RBP3.66□□□□□ -1.82
UBR2-201ENST00000372899 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
UBR2-201ENST00000372899 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
UBR2-201ENST00000372899 RNF213Q63HN8 5207 aa3.6□□□□□ -1.83
UBR2-201ENST00000372899 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
UBR2-201ENST00000372899 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
UBR2-201ENST00000372899 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
UBR2-201ENST00000372899 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
UBR2-201ENST00000372899 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
UBR2-201ENST00000372899 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
UBR2-201ENST00000372899 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
UBR2-201ENST00000372899 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
UBR2-201ENST00000372899 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
UBR2-201ENST00000372899 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
UBR2-201ENST00000372899 KMT2DO14686 5537 aa3.09□□□□□ -1.91
UBR2-201ENST00000372899 USH2AO75445 5202 aa3.07□□□□□ -1.92
UBR2-201ENST00000372899 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
UBR2-201ENST00000372899 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
UBR2-201ENST00000372899 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
UBR2-201ENST00000372899 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
UBR2-201ENST00000372899 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
UBR2-201ENST00000372899 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
UBR2-201ENST00000372899 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
UBR2-201ENST00000372899 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
UBR2-201ENST00000372899 NEBP20929 6669 aa2.77□□□□□ -1.97
UBR2-201ENST00000372899 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
UBR2-201ENST00000372899 MDN1Q9NU22 5596 aa2.59□□□□□ -2
UBR2-201ENST00000372899 PHGR1C9JFL3 82 aa2.53□□□□□ -2
UBR2-201ENST00000372899 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
UBR2-201ENST00000372899 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
UBR2-201ENST00000372899 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
UBR2-201ENST00000372899 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
UBR2-201ENST00000372899 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
UBR2-201ENST00000372899 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
UBR2-201ENST00000372899 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
UBR2-201ENST00000372899 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
UBR2-201ENST00000372899 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
UBR2-201ENST00000372899 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
UBR2-201ENST00000372899 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
UBR2-201ENST00000372899 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
UBR2-201ENST00000372899 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
UBR2-201ENST00000372899 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
UBR2-201ENST00000372899 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
UBR2-201ENST00000372899 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
UBR2-201ENST00000372899 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
UBR2-201ENST00000372899 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 72.1 ms