RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 LRP2P98164 4655 aa3.14□□□□□ -1.91
COL11A1-203ENST00000370096 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
COL11A1-203ENST00000370096 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
COL11A1-203ENST00000370096 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
COL11A1-203ENST00000370096 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
COL11A1-203ENST00000370096 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
COL11A1-203ENST00000370096 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
COL11A1-203ENST00000370096 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
COL11A1-203ENST00000370096 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
COL11A1-203ENST00000370096 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.92
COL11A1-203ENST00000370096 MT1AP04731 61 aa3.07□□□□□ -1.92
COL11A1-203ENST00000370096 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
COL11A1-203ENST00000370096 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
COL11A1-203ENST00000370096 HERC2O95714 4834 aa3.02□□□□□ -1.93
COL11A1-203ENST00000370096 HERC1Q15751 4861 aa3.02□□□□□ -1.93
COL11A1-203ENST00000370096 KMT2CQ8NEZ4 4911 aaKnown RBP3.02□□□□□ -1.93
COL11A1-203ENST00000370096 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
COL11A1-203ENST00000370096 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
COL11A1-203ENST00000370096 RYR2Q92736 4967 aa2.94□□□□□ -1.94
COL11A1-203ENST00000370096 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
COL11A1-203ENST00000370096 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
COL11A1-203ENST00000370096 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
COL11A1-203ENST00000370096 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.83□□□□□ -1.96
COL11A1-203ENST00000370096 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
COL11A1-203ENST00000370096 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
COL11A1-203ENST00000370096 KIAA1109Q2LD37 5005 aa2.76□□□□□ -1.97
COL11A1-203ENST00000370096 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
COL11A1-203ENST00000370096 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
COL11A1-203ENST00000370096 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
COL11A1-203ENST00000370096 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
COL11A1-203ENST00000370096 LCE2AQ5TA79 106 aaPredicted RBP2.71□□□□□ -1.97
COL11A1-203ENST00000370096 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
COL11A1-203ENST00000370096 BIRC6Q9NR09 4857 aa2.67□□□□□ -1.98
COL11A1-203ENST00000370096 FSIP2Q5CZC0 6907 aa2.63□□□□□ -1.99
COL11A1-203ENST00000370096 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
COL11A1-203ENST00000370096 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
COL11A1-203ENST00000370096 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
COL11A1-203ENST00000370096 MUC2Q02817 5179 aa2.53□□□□□ -2
COL11A1-203ENST00000370096 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
COL11A1-203ENST00000370096 FAT4Q6V0I7 4981 aa2.49□□□□□ -2.01
COL11A1-203ENST00000370096 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
COL11A1-203ENST00000370096 UBR4Q5T4S7 5183 aa2.43□□□□□ -2.02
COL11A1-203ENST00000370096 RNF213Q63HN8 5207 aa2.39□□□□□ -2.03
COL11A1-203ENST00000370096 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
COL11A1-203ENST00000370096 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
COL11A1-203ENST00000370096 ABCA13Q86UQ4 5058 aa2.39□□□□□ -2.03
COL11A1-203ENST00000370096 KMT2DO14686 5537 aa2.31□□□□□ -2.04
COL11A1-203ENST00000370096 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
COL11A1-203ENST00000370096 FCGBPQ9Y6R7 5405 aaPredicted RBP2.26□□□□□ -2.05
COL11A1-203ENST00000370096 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
COL11A1-203ENST00000370096 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
COL11A1-203ENST00000370096 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
COL11A1-203ENST00000370096 USH2AO75445 5202 aa2.12□□□□□ -2.07
COL11A1-203ENST00000370096 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
COL11A1-203ENST00000370096 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
COL11A1-203ENST00000370096 NEBP20929 6669 aa2.03□□□□□ -2.08
COL11A1-203ENST00000370096 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
COL11A1-203ENST00000370096 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
COL11A1-203ENST00000370096 MUC12Q9UKN1 5478 aa1.82□□□□□ -2.12
COL11A1-203ENST00000370096 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
COL11A1-203ENST00000370096 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
COL11A1-203ENST00000370096 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
COL11A1-203ENST00000370096 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
COL11A1-203ENST00000370096 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
COL11A1-203ENST00000370096 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
COL11A1-203ENST00000370096 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
COL11A1-203ENST00000370096 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
COL11A1-203ENST00000370096 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
COL11A1-203ENST00000370096 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
COL11A1-203ENST00000370096 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
COL11A1-203ENST00000370096 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
COL11A1-203ENST00000370096 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
COL11A1-203ENST00000370096 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
COL11A1-203ENST00000370096 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
COL11A1-203ENST00000370096 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
COL11A1-203ENST00000370096 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
COL11A1-203ENST00000370096 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 69.2 ms