RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.84
HCFC1-202ENST00000369984 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
HCFC1-202ENST00000369984 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
HCFC1-202ENST00000369984 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
HCFC1-202ENST00000369984 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
HCFC1-202ENST00000369984 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
HCFC1-202ENST00000369984 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
HCFC1-202ENST00000369984 KRTAP19-2Q3LHN2 52 aa3.53□□□□□ -1.84
HCFC1-202ENST00000369984 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.85
HCFC1-202ENST00000369984 MT1AP04731 61 aa3.47□□□□□ -1.85
HCFC1-202ENST00000369984 KMT2CQ8NEZ4 4911 aaKnown RBP3.46□□□□□ -1.85
HCFC1-202ENST00000369984 HYDINQ4G0P3 5121 aa3.44□□□□□ -1.86
HCFC1-202ENST00000369984 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
HCFC1-202ENST00000369984 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
HCFC1-202ENST00000369984 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
HCFC1-202ENST00000369984 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
HCFC1-202ENST00000369984 RYR2Q92736 4967 aa3.39□□□□□ -1.87
HCFC1-202ENST00000369984 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
HCFC1-202ENST00000369984 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
HCFC1-202ENST00000369984 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
HCFC1-202ENST00000369984 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
HCFC1-202ENST00000369984 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
HCFC1-202ENST00000369984 HERC2O95714 4834 aa3.24□□□□□ -1.89
HCFC1-202ENST00000369984 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
HCFC1-202ENST00000369984 KIAA1109Q2LD37 5005 aa3.19□□□□□ -1.9
HCFC1-202ENST00000369984 PCLOQ9Y6V0 5065 aa3.17□□□□□ -1.9
HCFC1-202ENST00000369984 HMCN2Q8NDA2 5059 aa3.15□□□□□ -1.9
HCFC1-202ENST00000369984 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.91
HCFC1-202ENST00000369984 LCE2AQ5TA79 106 aaPredicted RBP3.13□□□□□ -1.91
HCFC1-202ENST00000369984 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
HCFC1-202ENST00000369984 HERC1Q15751 4861 aa3.07□□□□□ -1.92
HCFC1-202ENST00000369984 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
HCFC1-202ENST00000369984 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
HCFC1-202ENST00000369984 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
HCFC1-202ENST00000369984 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
HCFC1-202ENST00000369984 RNF213Q63HN8 5207 aa2.78□□□□□ -1.96
HCFC1-202ENST00000369984 MUC2Q02817 5179 aa2.77□□□□□ -1.97
HCFC1-202ENST00000369984 EPPK1P58107 5090 aaKnown RBP2.76□□□□□ -1.97
HCFC1-202ENST00000369984 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
HCFC1-202ENST00000369984 FAT4Q6V0I7 4981 aa2.72□□□□□ -1.97
HCFC1-202ENST00000369984 KMT2DO14686 5537 aa2.7□□□□□ -1.98
HCFC1-202ENST00000369984 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
HCFC1-202ENST00000369984 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
HCFC1-202ENST00000369984 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
HCFC1-202ENST00000369984 ABCA13Q86UQ4 5058 aa2.59□□□□□ -1.99
HCFC1-202ENST00000369984 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
HCFC1-202ENST00000369984 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
HCFC1-202ENST00000369984 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
HCFC1-202ENST00000369984 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
HCFC1-202ENST00000369984 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
HCFC1-202ENST00000369984 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
HCFC1-202ENST00000369984 NEBP20929 6669 aa2.42□□□□□ -2.02
HCFC1-202ENST00000369984 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
HCFC1-202ENST00000369984 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
HCFC1-202ENST00000369984 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
HCFC1-202ENST00000369984 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
HCFC1-202ENST00000369984 USH2AO75445 5202 aa2.27□□□□□ -2.05
HCFC1-202ENST00000369984 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
HCFC1-202ENST00000369984 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
HCFC1-202ENST00000369984 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
HCFC1-202ENST00000369984 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.08
HCFC1-202ENST00000369984 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
HCFC1-202ENST00000369984 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
HCFC1-202ENST00000369984 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
HCFC1-202ENST00000369984 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
HCFC1-202ENST00000369984 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
HCFC1-202ENST00000369984 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
HCFC1-202ENST00000369984 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
HCFC1-202ENST00000369984 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
HCFC1-202ENST00000369984 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
HCFC1-202ENST00000369984 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
HCFC1-202ENST00000369984 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
HCFC1-202ENST00000369984 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
HCFC1-202ENST00000369984 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
HCFC1-202ENST00000369984 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
HCFC1-202ENST00000369984 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
HCFC1-202ENST00000369984 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms