RNA–Protein interactions for RNA: ENST00000369750.3

TPBG-201, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPBG, Length 6,484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-201ENST00000369750 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
TPBG-201ENST00000369750 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
TPBG-201ENST00000369750 MT1MQ8N339 61 aa4.98□□□□□ -1.61
TPBG-201ENST00000369750 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
TPBG-201ENST00000369750 MT3P25713 68 aa4.95□□□□□ -1.62
TPBG-201ENST00000369750 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
TPBG-201ENST00000369750 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
TPBG-201ENST00000369750 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
TPBG-201ENST00000369750 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
TPBG-201ENST00000369750 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
TPBG-201ENST00000369750 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
TPBG-201ENST00000369750 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
TPBG-201ENST00000369750 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
TPBG-201ENST00000369750 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
TPBG-201ENST00000369750 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
TPBG-201ENST00000369750 EPPK1P58107 5090 aaKnown RBP4.73□□□□□ -1.65
TPBG-201ENST00000369750 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.65
TPBG-201ENST00000369750 PRM1P04553 51 aa4.68□□□□□ -1.66
TPBG-201ENST00000369750 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
TPBG-201ENST00000369750 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
TPBG-201ENST00000369750 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
TPBG-201ENST00000369750 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
TPBG-201ENST00000369750 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
TPBG-201ENST00000369750 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
TPBG-201ENST00000369750 FAT4Q6V0I7 4981 aa4.53□□□□□ -1.68
TPBG-201ENST00000369750 MT1AP04731 61 aa4.52□□□□□ -1.69
TPBG-201ENST00000369750 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
TPBG-201ENST00000369750 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
TPBG-201ENST00000369750 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
TPBG-201ENST00000369750 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
TPBG-201ENST00000369750 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
TPBG-201ENST00000369750 MUC2Q02817 5179 aa4.39□□□□□ -1.71
TPBG-201ENST00000369750 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
TPBG-201ENST00000369750 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
TPBG-201ENST00000369750 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
TPBG-201ENST00000369750 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
TPBG-201ENST00000369750 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
TPBG-201ENST00000369750 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
TPBG-201ENST00000369750 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
TPBG-201ENST00000369750 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
TPBG-201ENST00000369750 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
TPBG-201ENST00000369750 NEBP20929 6669 aa3.87□□□□□ -1.79
TPBG-201ENST00000369750 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.8
TPBG-201ENST00000369750 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
TPBG-201ENST00000369750 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
TPBG-201ENST00000369750 KMT2DO14686 5537 aa3.69□□□□□ -1.82
TPBG-201ENST00000369750 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
TPBG-201ENST00000369750 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
TPBG-201ENST00000369750 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
TPBG-201ENST00000369750 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
TPBG-201ENST00000369750 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
TPBG-201ENST00000369750 USH2AO75445 5202 aa3.6□□□□□ -1.83
TPBG-201ENST00000369750 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
TPBG-201ENST00000369750 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
TPBG-201ENST00000369750 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
TPBG-201ENST00000369750 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
TPBG-201ENST00000369750 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
TPBG-201ENST00000369750 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
TPBG-201ENST00000369750 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
TPBG-201ENST00000369750 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
TPBG-201ENST00000369750 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
TPBG-201ENST00000369750 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
TPBG-201ENST00000369750 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
TPBG-201ENST00000369750 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
TPBG-201ENST00000369750 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
TPBG-201ENST00000369750 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
TPBG-201ENST00000369750 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
TPBG-201ENST00000369750 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
TPBG-201ENST00000369750 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
TPBG-201ENST00000369750 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
TPBG-201ENST00000369750 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
TPBG-201ENST00000369750 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
TPBG-201ENST00000369750 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
TPBG-201ENST00000369750 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
TPBG-201ENST00000369750 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TPBG-201ENST00000369750 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
TPBG-201ENST00000369750 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 97 ms