RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
FAM46C-201ENST00000369448 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
FAM46C-201ENST00000369448 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
FAM46C-201ENST00000369448 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
FAM46C-201ENST00000369448 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
FAM46C-201ENST00000369448 MT1MQ8N339 61 aa4.66□□□□□ -1.66
FAM46C-201ENST00000369448 SPRR2DP22532 72 aa4.61□□□□□ -1.67
FAM46C-201ENST00000369448 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
FAM46C-201ENST00000369448 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
FAM46C-201ENST00000369448 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
FAM46C-201ENST00000369448 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
FAM46C-201ENST00000369448 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
FAM46C-201ENST00000369448 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
FAM46C-201ENST00000369448 PRM1P04553 51 aa4.46□□□□□ -1.7
FAM46C-201ENST00000369448 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
FAM46C-201ENST00000369448 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
FAM46C-201ENST00000369448 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
FAM46C-201ENST00000369448 MT3P25713 68 aa4.33□□□□□ -1.72
FAM46C-201ENST00000369448 MT1AP04731 61 aa4.29□□□□□ -1.72
FAM46C-201ENST00000369448 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
FAM46C-201ENST00000369448 KMT2DO14686 5537 aa4.27□□□□□ -1.73
FAM46C-201ENST00000369448 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
FAM46C-201ENST00000369448 USH2AO75445 5202 aa4.23□□□□□ -1.73
FAM46C-201ENST00000369448 LCE2DQ5TA82 110 aaPredicted RBP4.2□□□□□ -1.74
FAM46C-201ENST00000369448 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
FAM46C-201ENST00000369448 MT4P47944 62 aa4.15□□□□□ -1.74
FAM46C-201ENST00000369448 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
FAM46C-201ENST00000369448 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
FAM46C-201ENST00000369448 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
FAM46C-201ENST00000369448 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
FAM46C-201ENST00000369448 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
FAM46C-201ENST00000369448 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
FAM46C-201ENST00000369448 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
FAM46C-201ENST00000369448 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
FAM46C-201ENST00000369448 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
FAM46C-201ENST00000369448 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
FAM46C-201ENST00000369448 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
FAM46C-201ENST00000369448 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
FAM46C-201ENST00000369448 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
FAM46C-201ENST00000369448 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
FAM46C-201ENST00000369448 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
FAM46C-201ENST00000369448 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
FAM46C-201ENST00000369448 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
FAM46C-201ENST00000369448 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.85
FAM46C-201ENST00000369448 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
FAM46C-201ENST00000369448 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
FAM46C-201ENST00000369448 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
FAM46C-201ENST00000369448 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
FAM46C-201ENST00000369448 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
FAM46C-201ENST00000369448 NEBP20929 6669 aa3.25□□□□□ -1.89
FAM46C-201ENST00000369448 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
FAM46C-201ENST00000369448 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
FAM46C-201ENST00000369448 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
FAM46C-201ENST00000369448 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
FAM46C-201ENST00000369448 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
FAM46C-201ENST00000369448 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
FAM46C-201ENST00000369448 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
FAM46C-201ENST00000369448 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
FAM46C-201ENST00000369448 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
FAM46C-201ENST00000369448 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
FAM46C-201ENST00000369448 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
FAM46C-201ENST00000369448 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
FAM46C-201ENST00000369448 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
FAM46C-201ENST00000369448 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
FAM46C-201ENST00000369448 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
FAM46C-201ENST00000369448 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
FAM46C-201ENST00000369448 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
FAM46C-201ENST00000369448 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
FAM46C-201ENST00000369448 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
FAM46C-201ENST00000369448 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
FAM46C-201ENST00000369448 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
FAM46C-201ENST00000369448 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
FAM46C-201ENST00000369448 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
FAM46C-201ENST00000369448 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
FAM46C-201ENST00000369448 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
FAM46C-201ENST00000369448 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
FAM46C-201ENST00000369448 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 70.4 ms