RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 KRTAP9-7A8MTY7 169 aa2.95□□□□□ -1.94
SIM1-202ENST00000369208 HERC2O95714 4834 aa2.95□□□□□ -1.94
SIM1-202ENST00000369208 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
SIM1-202ENST00000369208 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
SIM1-202ENST00000369208 KRTAP19-2Q3LHN2 52 aa2.92□□□□□ -1.94
SIM1-202ENST00000369208 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
SIM1-202ENST00000369208 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.95
SIM1-202ENST00000369208 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
SIM1-202ENST00000369208 EPPK1P58107 5090 aaKnown RBP2.9□□□□□ -1.95
SIM1-202ENST00000369208 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
SIM1-202ENST00000369208 LCE2AQ5TA79 106 aaPredicted RBP2.86□□□□□ -1.95
SIM1-202ENST00000369208 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
SIM1-202ENST00000369208 KIAA1109Q2LD37 5005 aa2.81□□□□□ -1.96
SIM1-202ENST00000369208 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
SIM1-202ENST00000369208 LRP2P98164 4655 aa2.79□□□□□ -1.96
SIM1-202ENST00000369208 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
SIM1-202ENST00000369208 LOC100996750A0A140TA64 210 aa2.78□□□□□ -1.96
SIM1-202ENST00000369208 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
SIM1-202ENST00000369208 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
SIM1-202ENST00000369208 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
SIM1-202ENST00000369208 LPAP08519 4548 aa2.74□□□□□ -1.97
SIM1-202ENST00000369208 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
SIM1-202ENST00000369208 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
SIM1-202ENST00000369208 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
SIM1-202ENST00000369208 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
SIM1-202ENST00000369208 KMT2CQ8NEZ4 4911 aaKnown RBP2.68□□□□□ -1.98
SIM1-202ENST00000369208 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
SIM1-202ENST00000369208 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
SIM1-202ENST00000369208 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
SIM1-202ENST00000369208 HMCN2Q8NDA2 5059 aa2.62□□□□□ -1.99
SIM1-202ENST00000369208 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
SIM1-202ENST00000369208 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
SIM1-202ENST00000369208 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
SIM1-202ENST00000369208 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
SIM1-202ENST00000369208 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
SIM1-202ENST00000369208 RNF213Q63HN8 5207 aa2.52□□□□□ -2.01
SIM1-202ENST00000369208 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
SIM1-202ENST00000369208 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.03
SIM1-202ENST00000369208 MUC2Q02817 5179 aa2.38□□□□□ -2.03
SIM1-202ENST00000369208 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
SIM1-202ENST00000369208 NEBP20929 6669 aa2.29□□□□□ -2.04
SIM1-202ENST00000369208 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
SIM1-202ENST00000369208 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
SIM1-202ENST00000369208 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
SIM1-202ENST00000369208 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
SIM1-202ENST00000369208 USH2AO75445 5202 aa2.16□□□□□ -2.06
SIM1-202ENST00000369208 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
SIM1-202ENST00000369208 KRTAP4-6Q9BYQ5 205 aa2.14□□□□□ -2.07
SIM1-202ENST00000369208 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
SIM1-202ENST00000369208 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.07
SIM1-202ENST00000369208 SSPOA2VEC9 5147 aa2.04□□□□□ -2.08
SIM1-202ENST00000369208 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
SIM1-202ENST00000369208 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SIM1-202ENST00000369208 KRTAP4-12Q9BQ66 201 aa1.95□□□□□ -2.1
SIM1-202ENST00000369208 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
SIM1-202ENST00000369208 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
SIM1-202ENST00000369208 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
SIM1-202ENST00000369208 KMT2DO14686 5537 aa1.91□□□□□ -2.1
SIM1-202ENST00000369208 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
SIM1-202ENST00000369208 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
SIM1-202ENST00000369208 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
SIM1-202ENST00000369208 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SIM1-202ENST00000369208 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
SIM1-202ENST00000369208 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
SIM1-202ENST00000369208 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
SIM1-202ENST00000369208 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
SIM1-202ENST00000369208 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
SIM1-202ENST00000369208 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SIM1-202ENST00000369208 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
SIM1-202ENST00000369208 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
SIM1-202ENST00000369208 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
SIM1-202ENST00000369208 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
SIM1-202ENST00000369208 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.2
SIM1-202ENST00000369208 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
SIM1-202ENST00000369208 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
SIM1-202ENST00000369208 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
SIM1-202ENST00000369208 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 106.9 ms