RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
CDC42BPA-205ENST00000366769 MT1MQ8N339 61 aa3.22□□□□□ -1.89
CDC42BPA-205ENST00000366769 PCLOQ9Y6V0 5065 aa3.22□□□□□ -1.89
CDC42BPA-205ENST00000366769 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
CDC42BPA-205ENST00000366769 KRTAP9-2Q9BYQ4 174 aa3.16□□□□□ -1.9
CDC42BPA-205ENST00000366769 HYDINQ4G0P3 5121 aa3.15□□□□□ -1.91
CDC42BPA-205ENST00000366769 KMT2CQ8NEZ4 4911 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-205ENST00000366769 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
CDC42BPA-205ENST00000366769 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
CDC42BPA-205ENST00000366769 BIRC6Q9NR09 4857 aa3.07□□□□□ -1.92
CDC42BPA-205ENST00000366769 LRP2P98164 4655 aa3.06□□□□□ -1.92
CDC42BPA-205ENST00000366769 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
CDC42BPA-205ENST00000366769 DNHD1Q96M86 4753 aa3.04□□□□□ -1.92
CDC42BPA-205ENST00000366769 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
CDC42BPA-205ENST00000366769 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
CDC42BPA-205ENST00000366769 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-205ENST00000366769 MT1AP04731 61 aa2.97□□□□□ -1.93
CDC42BPA-205ENST00000366769 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
CDC42BPA-205ENST00000366769 LPAP08519 4548 aa2.95□□□□□ -1.94
CDC42BPA-205ENST00000366769 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
CDC42BPA-205ENST00000366769 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
CDC42BPA-205ENST00000366769 HERC1Q15751 4861 aa2.89□□□□□ -1.95
CDC42BPA-205ENST00000366769 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-205ENST00000366769 LCE2AQ5TA79 106 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-205ENST00000366769 HERC2O95714 4834 aa2.77□□□□□ -1.97
CDC42BPA-205ENST00000366769 RYR2Q92736 4967 aa2.76□□□□□ -1.97
CDC42BPA-205ENST00000366769 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
CDC42BPA-205ENST00000366769 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
CDC42BPA-205ENST00000366769 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.97
CDC42BPA-205ENST00000366769 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
CDC42BPA-205ENST00000366769 FSIP2Q5CZC0 6907 aa2.69□□□□□ -1.98
CDC42BPA-205ENST00000366769 ABCA13Q86UQ4 5058 aa2.66□□□□□ -1.98
CDC42BPA-205ENST00000366769 KIAA1109Q2LD37 5005 aa2.65□□□□□ -1.99
CDC42BPA-205ENST00000366769 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-205ENST00000366769 RNF213Q63HN8 5207 aa2.62□□□□□ -1.99
CDC42BPA-205ENST00000366769 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
CDC42BPA-205ENST00000366769 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-205ENST00000366769 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
CDC42BPA-205ENST00000366769 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
CDC42BPA-205ENST00000366769 EPPK1P58107 5090 aaKnown RBP2.56□□□□□ -2
CDC42BPA-205ENST00000366769 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
CDC42BPA-205ENST00000366769 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
CDC42BPA-205ENST00000366769 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
CDC42BPA-205ENST00000366769 MUC2Q02817 5179 aa2.47□□□□□ -2.01
CDC42BPA-205ENST00000366769 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
CDC42BPA-205ENST00000366769 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
CDC42BPA-205ENST00000366769 KRTAP4-6Q9BYQ5 205 aa2.4□□□□□ -2.03
CDC42BPA-205ENST00000366769 KMT2DO14686 5537 aa2.39□□□□□ -2.03
CDC42BPA-205ENST00000366769 USH2AO75445 5202 aa2.35□□□□□ -2.03
CDC42BPA-205ENST00000366769 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
CDC42BPA-205ENST00000366769 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-205ENST00000366769 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-205ENST00000366769 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CDC42BPA-205ENST00000366769 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
CDC42BPA-205ENST00000366769 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
CDC42BPA-205ENST00000366769 NEBP20929 6669 aa2.07□□□□□ -2.08
CDC42BPA-205ENST00000366769 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
CDC42BPA-205ENST00000366769 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
CDC42BPA-205ENST00000366769 KRTAP5-9P26371 169 aa1.94□□□□□ -2.1
CDC42BPA-205ENST00000366769 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
CDC42BPA-205ENST00000366769 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
CDC42BPA-205ENST00000366769 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
CDC42BPA-205ENST00000366769 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
CDC42BPA-205ENST00000366769 KRTAP5-3Q6L8H2 238 aa1.73□□□□□ -2.13
CDC42BPA-205ENST00000366769 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
CDC42BPA-205ENST00000366769 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
CDC42BPA-205ENST00000366769 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
CDC42BPA-205ENST00000366769 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
CDC42BPA-205ENST00000366769 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
CDC42BPA-205ENST00000366769 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
CDC42BPA-205ENST00000366769 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
CDC42BPA-205ENST00000366769 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.21
CDC42BPA-205ENST00000366769 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
CDC42BPA-205ENST00000366769 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
CDC42BPA-205ENST00000366769 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
CDC42BPA-205ENST00000366769 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
CDC42BPA-205ENST00000366769 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 68.4 ms