RNA–Protein interactions for RNA: ENST00000366527.4

HNRNPU-203, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 12,852 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-203ENST00000366527 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
HNRNPU-203ENST00000366527 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
HNRNPU-203ENST00000366527 KRTAP19-6Q3LI70 58 aa1.29□□□□□ -2.2
HNRNPU-203ENST00000366527 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
HNRNPU-203ENST00000366527 KRTAP9-9Q9BYP9 154 aa1.28□□□□□ -2.2
HNRNPU-203ENST00000366527 LCE2AQ5TA79 106 aaPredicted RBP1.28□□□□□ -2.2
HNRNPU-203ENST00000366527 PCLOQ9Y6V0 5065 aa1.28□□□□□ -2.2
HNRNPU-203ENST00000366527 KRTAP19-8Q3LI54 63 aa1.27□□□□□ -2.21
HNRNPU-203ENST00000366527 KRTAP4-7Q9BYR0 210 aa1.27□□□□□ -2.21
HNRNPU-203ENST00000366527 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
HNRNPU-203ENST00000366527 HMCN2Q8NDA2 5059 aa1.26□□□□□ -2.21
HNRNPU-203ENST00000366527 KRTAP4-8A0A0G2JLE6 195 aa1.25□□□□□ -2.21
HNRNPU-203ENST00000366527 KRTAP4-8Q9BYQ9 185 aa1.25□□□□□ -2.21
HNRNPU-203ENST00000366527 KIAA1109Q2LD37 5005 aa1.25□□□□□ -2.21
HNRNPU-203ENST00000366527 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
HNRNPU-203ENST00000366527 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
HNRNPU-203ENST00000366527 KRTAP4-9Q9BYQ8 210 aa1.22□□□□□ -2.21
HNRNPU-203ENST00000366527 KRTAP2-2Q9BYT5 123 aa1.22□□□□□ -2.21
HNRNPU-203ENST00000366527 KRTAP2-1Q9BYU5 128 aa1.22□□□□□ -2.21
HNRNPU-203ENST00000366527 FAT4Q6V0I7 4981 aa1.2□□□□□ -2.22
HNRNPU-203ENST00000366527 LCE4AQ5TA78 99 aa1.2□□□□□ -2.22
HNRNPU-203ENST00000366527 KMT2DO14686 5537 aa1.2□□□□□ -2.22
HNRNPU-203ENST00000366527 PRM1P04553 51 aa1.19□□□□□ -2.22
HNRNPU-203ENST00000366527 LOC100996750A0A140TA64 210 aa1.19□□□□□ -2.22
HNRNPU-203ENST00000366527 MT1BP07438 61 aa1.19□□□□□ -2.22
HNRNPU-203ENST00000366527 KRTAP9-8Q9BYQ0 159 aa1.19□□□□□ -2.22
HNRNPU-203ENST00000366527 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
HNRNPU-203ENST00000366527 MT1LQ93083 61 aa1.18□□□□□ -2.22
HNRNPU-203ENST00000366527 MT1XP80297 61 aa1.18□□□□□ -2.22
HNRNPU-203ENST00000366527 RNF213Q63HN8 5207 aa1.17□□□□□ -2.22
HNRNPU-203ENST00000366527 MT1MQ8N339 61 aa1.14□□□□□ -2.23
HNRNPU-203ENST00000366527 KRTAP9-3Q9BYQ3 159 aa1.14□□□□□ -2.23
HNRNPU-203ENST00000366527 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
HNRNPU-203ENST00000366527 ABCA13Q86UQ4 5058 aa1.13□□□□□ -2.23
HNRNPU-203ENST00000366527 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.13□□□□□ -2.23
HNRNPU-203ENST00000366527 KRTAP19-7Q3SYF9 63 aa1.12□□□□□ -2.23
HNRNPU-203ENST00000366527 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
HNRNPU-203ENST00000366527 MUC2Q02817 5179 aa1.11□□□□□ -2.23
HNRNPU-203ENST00000366527 SYNE1Q8NF91 8797 aaKnown RBP1.1□□□□□ -2.23
HNRNPU-203ENST00000366527 GPR98Q8WXG9 6306 aa1.09□□□□□ -2.23
HNRNPU-203ENST00000366527 MT1EP04732 61 aa1.09□□□□□ -2.23
HNRNPU-203ENST00000366527 SSPOA2VEC9 5147 aa1.08□□□□□ -2.24
HNRNPU-203ENST00000366527 KRTAP4-3Q9BYR4 195 aa1.04□□□□□ -2.24
HNRNPU-203ENST00000366527 KRTAP4-2Q9BYR5 136 aa1.03□□□□□ -2.24
HNRNPU-203ENST00000366527 KRTAP9-4Q9BYQ2 154 aa1.03□□□□□ -2.24
HNRNPU-203ENST00000366527 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
HNRNPU-203ENST00000366527 HMCN1Q96RW7 5635 aa1.02□□□□□ -2.25
HNRNPU-203ENST00000366527 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
HNRNPU-203ENST00000366527 MT1AP04731 61 aa1.01□□□□□ -2.25
HNRNPU-203ENST00000366527 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
HNRNPU-203ENST00000366527 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
HNRNPU-203ENST00000366527 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
HNRNPU-203ENST00000366527 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
HNRNPU-203ENST00000366527 USH2AO75445 5202 aa0.96□□□□□ -2.26
HNRNPU-203ENST00000366527 KRTAP4-6Q9BYQ5 205 aa0.95□□□□□ -2.26
HNRNPU-203ENST00000366527 MUC12Q9UKN1 5478 aa0.95□□□□□ -2.26
HNRNPU-203ENST00000366527 KRTAP6-1Q3LI64 71 aa0.93□□□□□ -2.26
HNRNPU-203ENST00000366527 KRTAP9-6A8MVA2 160 aa0.92□□□□□ -2.26
HNRNPU-203ENST00000366527 KRTAP4-12Q9BQ66 201 aa0.9□□□□□ -2.27
HNRNPU-203ENST00000366527 KRTAP4-4Q9BYR3 166 aa0.89□□□□□ -2.27
HNRNPU-203ENST00000366527 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
HNRNPU-203ENST00000366527 KRTAP4-11Q9BYQ6 195 aa0.87□□□□□ -2.27
HNRNPU-203ENST00000366527 KRTAP19-2Q3LHN2 52 aa0.85□□□□□ -2.27
HNRNPU-203ENST00000366527 MUC19Q7Z5P9 8384 aa0.84□□□□□ -2.28
HNRNPU-203ENST00000366527 KRTAP5-5Q701N2 237 aaPredicted RBP0.82□□□□□ -2.28
HNRNPU-203ENST00000366527 KRTAP5-9P26371 169 aa0.78□□□□□ -2.28
HNRNPU-203ENST00000366527 KRTAP5-2Q701N4 177 aa0.78□□□□□ -2.28
HNRNPU-203ENST00000366527 KRTAP5-4Q6L8H1 288 aa0.77□□□□□ -2.29
HNRNPU-203ENST00000366527 KRTAP5-3Q6L8H2 238 aa0.73□□□□□ -2.29
HNRNPU-203ENST00000366527 KRTAP5-8O75690 187 aa0.63□□□□□ -2.31
HNRNPU-203ENST00000366527 KRTAP5-7Q6L8G8 165 aa0.6□□□□□ -2.31
HNRNPU-203ENST00000366527 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
HNRNPU-203ENST00000366527 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.57□□□□□ -2.32
HNRNPU-203ENST00000366527 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
HNRNPU-203ENST00000366527 KRTAP21-2Q3LI59 83 aa0.52□□□□□ -2.33
HNRNPU-203ENST00000366527 KRTAP5-11Q6L8G4 156 aa0.5□□□□□ -2.33
HNRNPU-203ENST00000366527 KRTAP5-1Q6L8H4 278 aa0.49□□□□□ -2.33
HNRNPU-203ENST00000366527 KRTAP5-10Q6L8G5 202 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms