RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
COL4A5-202ENST00000361603 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
COL4A5-202ENST00000361603 MT3P25713 68 aa3.58□□□□□ -1.84
COL4A5-202ENST00000361603 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
COL4A5-202ENST00000361603 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
COL4A5-202ENST00000361603 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
COL4A5-202ENST00000361603 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
COL4A5-202ENST00000361603 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
COL4A5-202ENST00000361603 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
COL4A5-202ENST00000361603 MT1AP04731 61 aa3.48□□□□□ -1.85
COL4A5-202ENST00000361603 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
COL4A5-202ENST00000361603 PRM1P04553 51 aa3.39□□□□□ -1.87
COL4A5-202ENST00000361603 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
COL4A5-202ENST00000361603 MT4P47944 62 aa3.35□□□□□ -1.87
COL4A5-202ENST00000361603 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
COL4A5-202ENST00000361603 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
COL4A5-202ENST00000361603 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
COL4A5-202ENST00000361603 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
COL4A5-202ENST00000361603 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
COL4A5-202ENST00000361603 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
COL4A5-202ENST00000361603 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
COL4A5-202ENST00000361603 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
COL4A5-202ENST00000361603 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.28□□□□□ -1.88
COL4A5-202ENST00000361603 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
COL4A5-202ENST00000361603 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
COL4A5-202ENST00000361603 LCE1DQ5T752 114 aa3.15□□□□□ -1.9
COL4A5-202ENST00000361603 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
COL4A5-202ENST00000361603 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
COL4A5-202ENST00000361603 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
COL4A5-202ENST00000361603 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
COL4A5-202ENST00000361603 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.91
COL4A5-202ENST00000361603 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
COL4A5-202ENST00000361603 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
COL4A5-202ENST00000361603 MUC2Q02817 5179 aa3.05□□□□□ -1.92
COL4A5-202ENST00000361603 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
COL4A5-202ENST00000361603 FSIP2Q5CZC0 6907 aa3.05□□□□□ -1.92
COL4A5-202ENST00000361603 USH2AO75445 5202 aa3.05□□□□□ -1.92
COL4A5-202ENST00000361603 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
COL4A5-202ENST00000361603 NEBP20929 6669 aa2.88□□□□□ -1.95
COL4A5-202ENST00000361603 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
COL4A5-202ENST00000361603 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
COL4A5-202ENST00000361603 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
COL4A5-202ENST00000361603 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
COL4A5-202ENST00000361603 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
COL4A5-202ENST00000361603 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
COL4A5-202ENST00000361603 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
COL4A5-202ENST00000361603 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
COL4A5-202ENST00000361603 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
COL4A5-202ENST00000361603 KMT2DO14686 5537 aa2.61□□□□□ -1.99
COL4A5-202ENST00000361603 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
COL4A5-202ENST00000361603 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
COL4A5-202ENST00000361603 MDN1Q9NU22 5596 aa2.54□□□□□ -2
COL4A5-202ENST00000361603 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
COL4A5-202ENST00000361603 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
COL4A5-202ENST00000361603 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
COL4A5-202ENST00000361603 MUC12Q9UKN1 5478 aa2.38□□□□□ -2.03
COL4A5-202ENST00000361603 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
COL4A5-202ENST00000361603 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
COL4A5-202ENST00000361603 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
COL4A5-202ENST00000361603 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
COL4A5-202ENST00000361603 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
COL4A5-202ENST00000361603 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
COL4A5-202ENST00000361603 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
COL4A5-202ENST00000361603 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
COL4A5-202ENST00000361603 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
COL4A5-202ENST00000361603 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
COL4A5-202ENST00000361603 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
COL4A5-202ENST00000361603 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
COL4A5-202ENST00000361603 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
COL4A5-202ENST00000361603 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
COL4A5-202ENST00000361603 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
COL4A5-202ENST00000361603 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
COL4A5-202ENST00000361603 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
COL4A5-202ENST00000361603 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
COL4A5-202ENST00000361603 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
COL4A5-202ENST00000361603 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
COL4A5-202ENST00000361603 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 46.7 ms