RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 KRTAP9-2Q9BYQ4 174 aa3.12□□□□□ -1.91
COL11A1-202ENST00000358392 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
COL11A1-202ENST00000358392 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
COL11A1-202ENST00000358392 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
COL11A1-202ENST00000358392 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
COL11A1-202ENST00000358392 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
COL11A1-202ENST00000358392 MT1AP04731 61 aa3.09□□□□□ -1.91
COL11A1-202ENST00000358392 MUC17Q685J3 4493 aa3.09□□□□□ -1.92
COL11A1-202ENST00000358392 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
COL11A1-202ENST00000358392 KMT2CQ8NEZ4 4911 aaKnown RBP3.07□□□□□ -1.92
COL11A1-202ENST00000358392 HERC2O95714 4834 aa3.06□□□□□ -1.92
COL11A1-202ENST00000358392 HYDINQ4G0P3 5121 aa3.04□□□□□ -1.92
COL11A1-202ENST00000358392 HERC1Q15751 4861 aa3.03□□□□□ -1.92
COL11A1-202ENST00000358392 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
COL11A1-202ENST00000358392 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
COL11A1-202ENST00000358392 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
COL11A1-202ENST00000358392 RYR2Q92736 4967 aa2.99□□□□□ -1.93
COL11A1-202ENST00000358392 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
COL11A1-202ENST00000358392 KRTAP9-4Q9BYQ2 154 aa2.91□□□□□ -1.94
COL11A1-202ENST00000358392 KRTAP9-6A0A140TA67 174 aa2.91□□□□□ -1.94
COL11A1-202ENST00000358392 LCE4AQ5TA78 99 aa2.9□□□□□ -1.94
COL11A1-202ENST00000358392 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
COL11A1-202ENST00000358392 KIAA1109Q2LD37 5005 aa2.84□□□□□ -1.96
COL11A1-202ENST00000358392 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
COL11A1-202ENST00000358392 HMCN2Q8NDA2 5059 aa2.8□□□□□ -1.96
COL11A1-202ENST00000358392 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
COL11A1-202ENST00000358392 BIRC6Q9NR09 4857 aa2.74□□□□□ -1.97
COL11A1-202ENST00000358392 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
COL11A1-202ENST00000358392 LCE2AQ5TA79 106 aaPredicted RBP2.71□□□□□ -1.98
COL11A1-202ENST00000358392 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
COL11A1-202ENST00000358392 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
COL11A1-202ENST00000358392 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
COL11A1-202ENST00000358392 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.62□□□□□ -1.99
COL11A1-202ENST00000358392 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
COL11A1-202ENST00000358392 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
COL11A1-202ENST00000358392 EPPK1P58107 5090 aaKnown RBP2.59□□□□□ -1.99
COL11A1-202ENST00000358392 MUC2Q02817 5179 aa2.58□□□□□ -2
COL11A1-202ENST00000358392 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
COL11A1-202ENST00000358392 FAT4Q6V0I7 4981 aa2.54□□□□□ -2
COL11A1-202ENST00000358392 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
COL11A1-202ENST00000358392 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
COL11A1-202ENST00000358392 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
COL11A1-202ENST00000358392 ABCA13Q86UQ4 5058 aa2.43□□□□□ -2.02
COL11A1-202ENST00000358392 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
COL11A1-202ENST00000358392 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
COL11A1-202ENST00000358392 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
COL11A1-202ENST00000358392 KMT2DO14686 5537 aa2.37□□□□□ -2.03
COL11A1-202ENST00000358392 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
COL11A1-202ENST00000358392 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
COL11A1-202ENST00000358392 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
COL11A1-202ENST00000358392 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
COL11A1-202ENST00000358392 USH2AO75445 5202 aa2.14□□□□□ -2.07
COL11A1-202ENST00000358392 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
COL11A1-202ENST00000358392 NEBP20929 6669 aa2.09□□□□□ -2.07
COL11A1-202ENST00000358392 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
COL11A1-202ENST00000358392 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
COL11A1-202ENST00000358392 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
COL11A1-202ENST00000358392 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
COL11A1-202ENST00000358392 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
COL11A1-202ENST00000358392 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
COL11A1-202ENST00000358392 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
COL11A1-202ENST00000358392 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
COL11A1-202ENST00000358392 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
COL11A1-202ENST00000358392 KRTAP5-3Q6L8H2 238 aa1.73□□□□□ -2.13
COL11A1-202ENST00000358392 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.14
COL11A1-202ENST00000358392 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
COL11A1-202ENST00000358392 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
COL11A1-202ENST00000358392 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
COL11A1-202ENST00000358392 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
COL11A1-202ENST00000358392 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
COL11A1-202ENST00000358392 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
COL11A1-202ENST00000358392 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
COL11A1-202ENST00000358392 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
COL11A1-202ENST00000358392 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
COL11A1-202ENST00000358392 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
COL11A1-202ENST00000358392 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
COL11A1-202ENST00000358392 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 38.2 ms