RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
FXR1-202ENST00000357559 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
FXR1-202ENST00000357559 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
FXR1-202ENST00000357559 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
FXR1-202ENST00000357559 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
FXR1-202ENST00000357559 LRP2P98164 4655 aa3□□□□□ -1.93
FXR1-202ENST00000357559 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
FXR1-202ENST00000357559 HERC1Q15751 4861 aa2.99□□□□□ -1.93
FXR1-202ENST00000357559 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
FXR1-202ENST00000357559 HERC2O95714 4834 aa2.94□□□□□ -1.94
FXR1-202ENST00000357559 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
FXR1-202ENST00000357559 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
FXR1-202ENST00000357559 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
FXR1-202ENST00000357559 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
FXR1-202ENST00000357559 KIAA1109Q2LD37 5005 aa2.94□□□□□ -1.94
FXR1-202ENST00000357559 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
FXR1-202ENST00000357559 ABCA13Q86UQ4 5058 aa2.91□□□□□ -1.94
FXR1-202ENST00000357559 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
FXR1-202ENST00000357559 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
FXR1-202ENST00000357559 KMT2CQ8NEZ4 4911 aaKnown RBP2.87□□□□□ -1.95
FXR1-202ENST00000357559 MT1AP04731 61 aa2.86□□□□□ -1.95
FXR1-202ENST00000357559 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
FXR1-202ENST00000357559 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
FXR1-202ENST00000357559 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
FXR1-202ENST00000357559 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
FXR1-202ENST00000357559 KRTAP9-4Q9BYQ2 154 aa2.73□□□□□ -1.97
FXR1-202ENST00000357559 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
FXR1-202ENST00000357559 LCE2AQ5TA79 106 aaPredicted RBP2.67□□□□□ -1.98
FXR1-202ENST00000357559 FSIP2Q5CZC0 6907 aa2.67□□□□□ -1.98
FXR1-202ENST00000357559 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
FXR1-202ENST00000357559 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
FXR1-202ENST00000357559 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
FXR1-202ENST00000357559 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
FXR1-202ENST00000357559 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
FXR1-202ENST00000357559 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
FXR1-202ENST00000357559 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
FXR1-202ENST00000357559 RNF213Q63HN8 5207 aa2.55□□□□□ -2
FXR1-202ENST00000357559 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
FXR1-202ENST00000357559 FAT4Q6V0I7 4981 aa2.49□□□□□ -2.01
FXR1-202ENST00000357559 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
FXR1-202ENST00000357559 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
FXR1-202ENST00000357559 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.02
FXR1-202ENST00000357559 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.02
FXR1-202ENST00000357559 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
FXR1-202ENST00000357559 MUC2Q02817 5179 aa2.37□□□□□ -2.03
FXR1-202ENST00000357559 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.04
FXR1-202ENST00000357559 KMT2DO14686 5537 aa2.28□□□□□ -2.04
FXR1-202ENST00000357559 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
FXR1-202ENST00000357559 USH2AO75445 5202 aa2.15□□□□□ -2.06
FXR1-202ENST00000357559 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
FXR1-202ENST00000357559 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.08
FXR1-202ENST00000357559 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
FXR1-202ENST00000357559 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
FXR1-202ENST00000357559 NEBP20929 6669 aa1.99□□□□□ -2.09
FXR1-202ENST00000357559 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
FXR1-202ENST00000357559 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
FXR1-202ENST00000357559 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
FXR1-202ENST00000357559 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
FXR1-202ENST00000357559 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
FXR1-202ENST00000357559 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
FXR1-202ENST00000357559 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
FXR1-202ENST00000357559 KRTAP5-3Q6L8H2 238 aa1.69□□□□□ -2.14
FXR1-202ENST00000357559 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
FXR1-202ENST00000357559 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
FXR1-202ENST00000357559 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
FXR1-202ENST00000357559 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
FXR1-202ENST00000357559 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
FXR1-202ENST00000357559 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
FXR1-202ENST00000357559 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
FXR1-202ENST00000357559 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
FXR1-202ENST00000357559 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
FXR1-202ENST00000357559 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
FXR1-202ENST00000357559 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
FXR1-202ENST00000357559 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
FXR1-202ENST00000357559 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
FXR1-202ENST00000357559 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
FXR1-202ENST00000357559 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms