RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 MT1MQ8N339 61 aa2□□□□□ -2.09
TRIM38-201ENST00000357085 RNF213Q63HN8 5207 aa1.98□□□□□ -2.09
TRIM38-201ENST00000357085 SPRR2BP35325 72 aa1.97□□□□□ -2.09
TRIM38-201ENST00000357085 EPPK1P58107 5090 aaKnown RBP1.95□□□□□ -2.1
TRIM38-201ENST00000357085 KRTAP19-6Q3LI70 58 aa1.94□□□□□ -2.1
TRIM38-201ENST00000357085 LOC100996750A0A140TA64 210 aa1.93□□□□□ -2.1
TRIM38-201ENST00000357085 LCE2BO14633 110 aa1.91□□□□□ -2.1
TRIM38-201ENST00000357085 KRTAP9-2Q9BYQ4 174 aa1.88□□□□□ -2.11
TRIM38-201ENST00000357085 MUC2Q02817 5179 aa1.87□□□□□ -2.11
TRIM38-201ENST00000357085 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
TRIM38-201ENST00000357085 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
TRIM38-201ENST00000357085 KRTAP9-7A8MTY7 169 aa1.84□□□□□ -2.11
TRIM38-201ENST00000357085 KRTAP4-3Q9BYR4 195 aa1.84□□□□□ -2.12
TRIM38-201ENST00000357085 LCE5AQ5TCM9 118 aa1.83□□□□□ -2.12
TRIM38-201ENST00000357085 SPRR2EP22531 72 aa1.83□□□□□ -2.12
TRIM38-201ENST00000357085 KRTAP4-9Q9BYQ8 210 aa1.83□□□□□ -2.12
TRIM38-201ENST00000357085 KRTAP9-6A0A140TA67 174 aa1.82□□□□□ -2.12
TRIM38-201ENST00000357085 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
TRIM38-201ENST00000357085 SPRR2DP22532 72 aa1.81□□□□□ -2.12
TRIM38-201ENST00000357085 UBR4Q5T4S7 5183 aa1.8□□□□□ -2.12
TRIM38-201ENST00000357085 LCE1AQ5T7P2 110 aa1.78□□□□□ -2.12
TRIM38-201ENST00000357085 LCE2AQ5TA79 106 aaPredicted RBP1.77□□□□□ -2.13
TRIM38-201ENST00000357085 KRTAP2-2Q9BYT5 123 aa1.74□□□□□ -2.13
TRIM38-201ENST00000357085 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
TRIM38-201ENST00000357085 KRTAP4-6Q9BYQ5 205 aa1.73□□□□□ -2.13
TRIM38-201ENST00000357085 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
TRIM38-201ENST00000357085 KRTAP9-4Q9BYQ2 154 aa1.71□□□□□ -2.14
TRIM38-201ENST00000357085 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
TRIM38-201ENST00000357085 USH2AO75445 5202 aa1.69□□□□□ -2.14
TRIM38-201ENST00000357085 KMT2DO14686 5537 aa1.68□□□□□ -2.14
TRIM38-201ENST00000357085 OBSCNQ5VST9 7968 aa1.63□□□□□ -2.15
TRIM38-201ENST00000357085 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
TRIM38-201ENST00000357085 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
TRIM38-201ENST00000357085 SYNE1Q8NF91 8797 aaKnown RBP1.6□□□□□ -2.15
TRIM38-201ENST00000357085 LCE1EQ5T753 118 aa1.59□□□□□ -2.16
TRIM38-201ENST00000357085 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.57□□□□□ -2.16
TRIM38-201ENST00000357085 KRTAP5-9P26371 169 aa1.56□□□□□ -2.16
TRIM38-201ENST00000357085 LCE4AQ5TA78 99 aa1.56□□□□□ -2.16
TRIM38-201ENST00000357085 LCE1DQ5T752 114 aa1.55□□□□□ -2.16
TRIM38-201ENST00000357085 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
TRIM38-201ENST00000357085 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
TRIM38-201ENST00000357085 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
TRIM38-201ENST00000357085 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
TRIM38-201ENST00000357085 KRTAP4-12Q9BQ66 201 aa1.47□□□□□ -2.17
TRIM38-201ENST00000357085 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
TRIM38-201ENST00000357085 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
TRIM38-201ENST00000357085 KRTAP9-9Q9BYP9 154 aa1.45□□□□□ -2.18
TRIM38-201ENST00000357085 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
TRIM38-201ENST00000357085 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
TRIM38-201ENST00000357085 FSIP2Q5CZC0 6907 aa1.43□□□□□ -2.18
TRIM38-201ENST00000357085 KRTAP4-11Q9BYQ6 195 aa1.42□□□□□ -2.18
TRIM38-201ENST00000357085 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
TRIM38-201ENST00000357085 MT4P47944 62 aa1.39□□□□□ -2.19
TRIM38-201ENST00000357085 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
TRIM38-201ENST00000357085 KRTAP4-2Q9BYR5 136 aa1.37□□□□□ -2.19
TRIM38-201ENST00000357085 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
TRIM38-201ENST00000357085 LCE1FQ5T754 118 aa1.35□□□□□ -2.19
TRIM38-201ENST00000357085 KRTAP5-4Q6L8H1 288 aa1.34□□□□□ -2.19
TRIM38-201ENST00000357085 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
TRIM38-201ENST00000357085 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
TRIM38-201ENST00000357085 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
TRIM38-201ENST00000357085 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
TRIM38-201ENST00000357085 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
TRIM38-201ENST00000357085 KRTAP5-3Q6L8H2 238 aa1.24□□□□□ -2.21
TRIM38-201ENST00000357085 NEBP20929 6669 aa1.21□□□□□ -2.22
TRIM38-201ENST00000357085 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
TRIM38-201ENST00000357085 KRTAP5-1Q6L8H4 278 aa1.19□□□□□ -2.22
TRIM38-201ENST00000357085 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
TRIM38-201ENST00000357085 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
TRIM38-201ENST00000357085 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
TRIM38-201ENST00000357085 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
TRIM38-201ENST00000357085 KRTAP5-11Q6L8G4 156 aa1.09□□□□□ -2.23
TRIM38-201ENST00000357085 KRTAP5-8O75690 187 aa1.08□□□□□ -2.24
TRIM38-201ENST00000357085 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
TRIM38-201ENST00000357085 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
TRIM38-201ENST00000357085 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
TRIM38-201ENST00000357085 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 90.7 ms