RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 LCE1EQ5T753 118 aa1.65□□□□□ -2.15
SRGAP1-201ENST00000355086 LCE1FQ5T754 118 aa1.65□□□□□ -2.15
SRGAP1-201ENST00000355086 LCE1AQ5T7P2 110 aa1.65□□□□□ -2.15
SRGAP1-201ENST00000355086 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
SRGAP1-201ENST00000355086 KRTAP4-9Q9BYQ8 210 aa1.64□□□□□ -2.15
SRGAP1-201ENST00000355086 MT1AP04731 61 aa1.62□□□□□ -2.15
SRGAP1-201ENST00000355086 KRTAP9-6A0A140TA67 174 aa1.62□□□□□ -2.15
SRGAP1-201ENST00000355086 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
SRGAP1-201ENST00000355086 KRTAP2-3P0C7H8 128 aa1.61□□□□□ -2.15
SRGAP1-201ENST00000355086 KRTAP2-4Q9BYR9 128 aa1.61□□□□□ -2.15
SRGAP1-201ENST00000355086 KRTAP2-1Q9BYU5 128 aa1.61□□□□□ -2.15
SRGAP1-201ENST00000355086 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.15
SRGAP1-201ENST00000355086 KRTAP19-2Q3LHN2 52 aa1.57□□□□□ -2.16
SRGAP1-201ENST00000355086 RYR2Q92736 4967 aa1.57□□□□□ -2.16
SRGAP1-201ENST00000355086 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
SRGAP1-201ENST00000355086 BIRC6Q9NR09 4857 aa1.55□□□□□ -2.16
SRGAP1-201ENST00000355086 KRTAP19-7Q3SYF9 63 aa1.55□□□□□ -2.16
SRGAP1-201ENST00000355086 KRTAP9-7A8MTY7 169 aa1.54□□□□□ -2.16
SRGAP1-201ENST00000355086 LCE4AQ5TA78 99 aa1.53□□□□□ -2.17
SRGAP1-201ENST00000355086 KRTAP9-4Q9BYQ2 154 aa1.52□□□□□ -2.17
SRGAP1-201ENST00000355086 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
SRGAP1-201ENST00000355086 HERC1Q15751 4861 aa1.52□□□□□ -2.17
SRGAP1-201ENST00000355086 LCE2AQ5TA79 106 aaPredicted RBP1.49□□□□□ -2.17
SRGAP1-201ENST00000355086 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
SRGAP1-201ENST00000355086 EPPK1P58107 5090 aaKnown RBP1.48□□□□□ -2.17
SRGAP1-201ENST00000355086 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
SRGAP1-201ENST00000355086 KRTAP2-2Q9BYT5 123 aa1.48□□□□□ -2.17
SRGAP1-201ENST00000355086 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
SRGAP1-201ENST00000355086 MUC2Q02817 5179 aa1.47□□□□□ -2.17
SRGAP1-201ENST00000355086 KIAA1109Q2LD37 5005 aa1.47□□□□□ -2.17
SRGAP1-201ENST00000355086 HYDINQ4G0P3 5121 aa1.45□□□□□ -2.18
SRGAP1-201ENST00000355086 KRTAP9-9Q9BYP9 154 aa1.45□□□□□ -2.18
SRGAP1-201ENST00000355086 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
SRGAP1-201ENST00000355086 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.43□□□□□ -2.18
SRGAP1-201ENST00000355086 KRTAP9-6A8MVA2 160 aa1.39□□□□□ -2.19
SRGAP1-201ENST00000355086 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
SRGAP1-201ENST00000355086 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.19
SRGAP1-201ENST00000355086 KRTAP4-11Q9BYQ6 195 aa1.34□□□□□ -2.19
SRGAP1-201ENST00000355086 UBR4Q5T4S7 5183 aa1.34□□□□□ -2.19
SRGAP1-201ENST00000355086 FAT4Q6V0I7 4981 aa1.33□□□□□ -2.2
SRGAP1-201ENST00000355086 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
SRGAP1-201ENST00000355086 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
SRGAP1-201ENST00000355086 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
SRGAP1-201ENST00000355086 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
SRGAP1-201ENST00000355086 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
SRGAP1-201ENST00000355086 DSTQ03001 7570 aaKnown RBP1.24□□□□□ -2.21
SRGAP1-201ENST00000355086 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
SRGAP1-201ENST00000355086 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
SRGAP1-201ENST00000355086 KRTAP4-6Q9BYQ5 205 aa1.22□□□□□ -2.21
SRGAP1-201ENST00000355086 KMT2DO14686 5537 aa1.22□□□□□ -2.21
SRGAP1-201ENST00000355086 KRTAP4-12Q9BQ66 201 aa1.22□□□□□ -2.21
SRGAP1-201ENST00000355086 KRTAP4-2Q9BYR5 136 aa1.22□□□□□ -2.21
SRGAP1-201ENST00000355086 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
SRGAP1-201ENST00000355086 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
SRGAP1-201ENST00000355086 NEBP20929 6669 aa1.19□□□□□ -2.22
SRGAP1-201ENST00000355086 USH2AO75445 5202 aa1.18□□□□□ -2.22
SRGAP1-201ENST00000355086 KRTAP5-9P26371 169 aa1.14□□□□□ -2.23
SRGAP1-201ENST00000355086 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
SRGAP1-201ENST00000355086 KRTAP5-4Q6L8H1 288 aa1.1□□□□□ -2.23
SRGAP1-201ENST00000355086 KRTAP5-5Q701N2 237 aaPredicted RBP1.09□□□□□ -2.24
SRGAP1-201ENST00000355086 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
SRGAP1-201ENST00000355086 HMCN1Q96RW7 5635 aa1.06□□□□□ -2.24
SRGAP1-201ENST00000355086 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
SRGAP1-201ENST00000355086 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
SRGAP1-201ENST00000355086 KRTAP5-3Q6L8H2 238 aa0.95□□□□□ -2.26
SRGAP1-201ENST00000355086 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
SRGAP1-201ENST00000355086 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
SRGAP1-201ENST00000355086 KRTAP5-8O75690 187 aa0.87□□□□□ -2.27
SRGAP1-201ENST00000355086 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.28
SRGAP1-201ENST00000355086 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
SRGAP1-201ENST00000355086 KRTAP5-2Q701N4 177 aa0.81□□□□□ -2.28
SRGAP1-201ENST00000355086 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
SRGAP1-201ENST00000355086 KRTAP5-11Q6L8G4 156 aa0.75□□□□□ -2.29
SRGAP1-201ENST00000355086 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.71□□□□□ -2.3
SRGAP1-201ENST00000355086 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
SRGAP1-201ENST00000355086 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
SRGAP1-201ENST00000355086 KRTAP5-7Q6L8G8 165 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 54.7 ms