RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 HERC1Q15751 4861 aa1.71□□□□□ -2.14
CKAP5-202ENST00000354558 FAT4Q6V0I7 4981 aa1.71□□□□□ -2.14
CKAP5-202ENST00000354558 KRTAP9-8Q9BYQ0 159 aa1.7□□□□□ -2.14
CKAP5-202ENST00000354558 UBR4Q5T4S7 5183 aa1.69□□□□□ -2.14
CKAP5-202ENST00000354558 KRTAP9-3Q9BYQ3 159 aa1.69□□□□□ -2.14
CKAP5-202ENST00000354558 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
CKAP5-202ENST00000354558 LCE1EQ5T753 118 aa1.69□□□□□ -2.14
CKAP5-202ENST00000354558 LCE1FQ5T754 118 aa1.69□□□□□ -2.14
CKAP5-202ENST00000354558 LCE1AQ5T7P2 110 aa1.69□□□□□ -2.14
CKAP5-202ENST00000354558 MT3P25713 68 aa1.69□□□□□ -2.14
CKAP5-202ENST00000354558 MT1BP07438 61 aa1.68□□□□□ -2.14
CKAP5-202ENST00000354558 KRTAP4-9Q9BYQ8 210 aa1.66□□□□□ -2.14
CKAP5-202ENST00000354558 MUC2Q02817 5179 aa1.66□□□□□ -2.14
CKAP5-202ENST00000354558 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
CKAP5-202ENST00000354558 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.64□□□□□ -2.15
CKAP5-202ENST00000354558 HMCN2Q8NDA2 5059 aa1.64□□□□□ -2.15
CKAP5-202ENST00000354558 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
CKAP5-202ENST00000354558 KRTAP2-2Q9BYT5 123 aa1.63□□□□□ -2.15
CKAP5-202ENST00000354558 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
CKAP5-202ENST00000354558 KRTAP9-4Q9BYQ2 154 aa1.6□□□□□ -2.15
CKAP5-202ENST00000354558 LRP2P98164 4655 aa1.6□□□□□ -2.15
CKAP5-202ENST00000354558 MT1MQ8N339 61 aa1.59□□□□□ -2.15
CKAP5-202ENST00000354558 MT1EP04732 61 aa1.59□□□□□ -2.16
CKAP5-202ENST00000354558 KRTAP4-7Q9BYR0 210 aa1.59□□□□□ -2.16
CKAP5-202ENST00000354558 MT1LQ93083 61 aa1.58□□□□□ -2.16
CKAP5-202ENST00000354558 KRTAP9-9Q9BYP9 154 aa1.57□□□□□ -2.16
CKAP5-202ENST00000354558 FLGP20930 4061 aaPredicted RBP1.56□□□□□ -2.16
CKAP5-202ENST00000354558 LOC100996750A0A140TA64 210 aa1.55□□□□□ -2.16
CKAP5-202ENST00000354558 KRTAP4-3Q9BYR4 195 aa1.53□□□□□ -2.16
CKAP5-202ENST00000354558 KRTAP19-2Q3LHN2 52 aa1.53□□□□□ -2.16
CKAP5-202ENST00000354558 PRM1P04553 51 aa1.51□□□□□ -2.17
CKAP5-202ENST00000354558 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
CKAP5-202ENST00000354558 MT1AP04731 61 aa1.46□□□□□ -2.18
CKAP5-202ENST00000354558 RNF213Q63HN8 5207 aa1.45□□□□□ -2.18
CKAP5-202ENST00000354558 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
CKAP5-202ENST00000354558 FSIP2Q5CZC0 6907 aa1.42□□□□□ -2.18
CKAP5-202ENST00000354558 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
CKAP5-202ENST00000354558 KRTAP4-12Q9BQ66 201 aa1.34□□□□□ -2.2
CKAP5-202ENST00000354558 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
CKAP5-202ENST00000354558 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.2
CKAP5-202ENST00000354558 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
CKAP5-202ENST00000354558 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
CKAP5-202ENST00000354558 USH2AO75445 5202 aa1.3□□□□□ -2.2
CKAP5-202ENST00000354558 KRTAP4-6Q9BYQ5 205 aa1.29□□□□□ -2.2
CKAP5-202ENST00000354558 NEBP20929 6669 aa1.27□□□□□ -2.21
CKAP5-202ENST00000354558 KRTAP4-2Q9BYR5 136 aa1.25□□□□□ -2.21
CKAP5-202ENST00000354558 KRTAP9-6A8MVA2 160 aa1.23□□□□□ -2.21
CKAP5-202ENST00000354558 MACF1Q9UPN3 7388 aaKnown RBP1.21□□□□□ -2.21
CKAP5-202ENST00000354558 KRTAP4-11Q9BYQ6 195 aa1.2□□□□□ -2.22
CKAP5-202ENST00000354558 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
CKAP5-202ENST00000354558 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
CKAP5-202ENST00000354558 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
CKAP5-202ENST00000354558 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
CKAP5-202ENST00000354558 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
CKAP5-202ENST00000354558 KMT2DO14686 5537 aa1.17□□□□□ -2.22
CKAP5-202ENST00000354558 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
CKAP5-202ENST00000354558 KRTAP5-9P26371 169 aa1.16□□□□□ -2.22
CKAP5-202ENST00000354558 OBSCNQ5VST9 7968 aa1.15□□□□□ -2.23
CKAP5-202ENST00000354558 KRTAP5-4Q6L8H1 288 aa1.15□□□□□ -2.23
CKAP5-202ENST00000354558 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
CKAP5-202ENST00000354558 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.23
CKAP5-202ENST00000354558 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
CKAP5-202ENST00000354558 KRTAP5-5Q701N2 237 aaPredicted RBP1.05□□□□□ -2.24
CKAP5-202ENST00000354558 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
CKAP5-202ENST00000354558 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
CKAP5-202ENST00000354558 KRTAP5-3Q6L8H2 238 aa1.03□□□□□ -2.24
CKAP5-202ENST00000354558 DSTQ03001 7570 aaKnown RBP1.03□□□□□ -2.25
CKAP5-202ENST00000354558 MUC12Q9UKN1 5478 aa0.99□□□□□ -2.25
CKAP5-202ENST00000354558 KRTAP5-8O75690 187 aa0.93□□□□□ -2.26
CKAP5-202ENST00000354558 MUC19Q7Z5P9 8384 aa0.93□□□□□ -2.26
CKAP5-202ENST00000354558 KRTAP5-11Q6L8G4 156 aa0.83□□□□□ -2.28
CKAP5-202ENST00000354558 KRTAP5-1Q6L8H4 278 aa0.78□□□□□ -2.28
CKAP5-202ENST00000354558 KRTAP5-2Q701N4 177 aa0.77□□□□□ -2.29
CKAP5-202ENST00000354558 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CKAP5-202ENST00000354558 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
CKAP5-202ENST00000354558 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.69□□□□□ -2.3
CKAP5-202ENST00000354558 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms