RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 LCE2DQ5TA82 110 aaPredicted RBP6.41□□□□□ -1.38
RNF38-202ENST00000350199 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
RNF38-202ENST00000350199 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
RNF38-202ENST00000350199 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
RNF38-202ENST00000350199 MT1MQ8N339 61 aa6.29□□□□□ -1.4
RNF38-202ENST00000350199 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
RNF38-202ENST00000350199 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
RNF38-202ENST00000350199 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
RNF38-202ENST00000350199 USH2AO75445 5202 aa6.09□□□□□ -1.44
RNF38-202ENST00000350199 LCE3DQ9BYE3 92 aa5.98□□□□□ -1.45
RNF38-202ENST00000350199 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
RNF38-202ENST00000350199 LCE3EQ5T5B0 92 aa5.87□□□□□ -1.47
RNF38-202ENST00000350199 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
RNF38-202ENST00000350199 KMT2DO14686 5537 aa5.81□□□□□ -1.48
RNF38-202ENST00000350199 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
RNF38-202ENST00000350199 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
RNF38-202ENST00000350199 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
RNF38-202ENST00000350199 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
RNF38-202ENST00000350199 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
RNF38-202ENST00000350199 MT1AP04731 61 aa5.73□□□□□ -1.49
RNF38-202ENST00000350199 MT3P25713 68 aa5.71□□□□□ -1.49
RNF38-202ENST00000350199 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
RNF38-202ENST00000350199 MT4P47944 62 aa5.69□□□□□ -1.5
RNF38-202ENST00000350199 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
RNF38-202ENST00000350199 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
RNF38-202ENST00000350199 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
RNF38-202ENST00000350199 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
RNF38-202ENST00000350199 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
RNF38-202ENST00000350199 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
RNF38-202ENST00000350199 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
RNF38-202ENST00000350199 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
RNF38-202ENST00000350199 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
RNF38-202ENST00000350199 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
RNF38-202ENST00000350199 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
RNF38-202ENST00000350199 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
RNF38-202ENST00000350199 PRM1P04553 51 aa5.35□□□□□ -1.55
RNF38-202ENST00000350199 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
RNF38-202ENST00000350199 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
RNF38-202ENST00000350199 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
RNF38-202ENST00000350199 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
RNF38-202ENST00000350199 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
RNF38-202ENST00000350199 LCE1BQ5T7P3 118 aa5.18□□□□□ -1.58
RNF38-202ENST00000350199 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
RNF38-202ENST00000350199 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
RNF38-202ENST00000350199 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
RNF38-202ENST00000350199 NEBP20929 6669 aa4.92□□□□□ -1.62
RNF38-202ENST00000350199 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
RNF38-202ENST00000350199 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
RNF38-202ENST00000350199 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
RNF38-202ENST00000350199 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
RNF38-202ENST00000350199 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
RNF38-202ENST00000350199 LCE1CQ5T751 118 aa4.15□□□□□ -1.74
RNF38-202ENST00000350199 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
RNF38-202ENST00000350199 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
RNF38-202ENST00000350199 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
RNF38-202ENST00000350199 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
RNF38-202ENST00000350199 MUC19Q7Z5P9 8384 aa3.98□□□□□ -1.77
RNF38-202ENST00000350199 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
RNF38-202ENST00000350199 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
RNF38-202ENST00000350199 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
RNF38-202ENST00000350199 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
RNF38-202ENST00000350199 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
RNF38-202ENST00000350199 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
RNF38-202ENST00000350199 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
RNF38-202ENST00000350199 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
RNF38-202ENST00000350199 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
RNF38-202ENST00000350199 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
RNF38-202ENST00000350199 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
RNF38-202ENST00000350199 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
RNF38-202ENST00000350199 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
RNF38-202ENST00000350199 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
RNF38-202ENST00000350199 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
RNF38-202ENST00000350199 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
RNF38-202ENST00000350199 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
RNF38-202ENST00000350199 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
RNF38-202ENST00000350199 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
RNF38-202ENST00000350199 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms