RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 LPAP08519 4548 aa1.99□□□□□ -2.09
RFC1-201ENST00000349703 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
RFC1-201ENST00000349703 CRCT1Q9UGL9 99 aa1.97□□□□□ -2.09
RFC1-201ENST00000349703 EPPK1P58107 5090 aaKnown RBP1.95□□□□□ -2.1
RFC1-201ENST00000349703 KIAA1109Q2LD37 5005 aa1.94□□□□□ -2.1
RFC1-201ENST00000349703 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
RFC1-201ENST00000349703 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
RFC1-201ENST00000349703 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
RFC1-201ENST00000349703 KRTAP2-1Q9BYU5 128 aa1.94□□□□□ -2.1
RFC1-201ENST00000349703 ABCA13Q86UQ4 5058 aa1.92□□□□□ -2.1
RFC1-201ENST00000349703 HERC2O95714 4834 aa1.91□□□□□ -2.1
RFC1-201ENST00000349703 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
RFC1-201ENST00000349703 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
RFC1-201ENST00000349703 PCLOQ9Y6V0 5065 aa1.85□□□□□ -2.11
RFC1-201ENST00000349703 MT1LQ93083 61 aa1.82□□□□□ -2.12
RFC1-201ENST00000349703 MUC2Q02817 5179 aa1.82□□□□□ -2.12
RFC1-201ENST00000349703 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
RFC1-201ENST00000349703 MT1EP04732 61 aa1.81□□□□□ -2.12
RFC1-201ENST00000349703 KRTAP9-6A8MVA2 160 aa1.79□□□□□ -2.12
RFC1-201ENST00000349703 HMCN2Q8NDA2 5059 aa1.76□□□□□ -2.13
RFC1-201ENST00000349703 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
RFC1-201ENST00000349703 MT1GP13640 62 aa1.76□□□□□ -2.13
RFC1-201ENST00000349703 PRM1P04553 51 aa1.73□□□□□ -2.13
RFC1-201ENST00000349703 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
RFC1-201ENST00000349703 MT1AP04731 61 aa1.7□□□□□ -2.14
RFC1-201ENST00000349703 MT1MQ8N339 61 aa1.68□□□□□ -2.14
RFC1-201ENST00000349703 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
RFC1-201ENST00000349703 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
RFC1-201ENST00000349703 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
RFC1-201ENST00000349703 FAT4Q6V0I7 4981 aa1.66□□□□□ -2.14
RFC1-201ENST00000349703 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
RFC1-201ENST00000349703 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
RFC1-201ENST00000349703 UBR4Q5T4S7 5183 aa1.64□□□□□ -2.15
RFC1-201ENST00000349703 KRTAP4-3Q9BYR4 195 aa1.61□□□□□ -2.15
RFC1-201ENST00000349703 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
RFC1-201ENST00000349703 KRTAP20-1Q3LI63 56 aa1.57□□□□□ -2.16
RFC1-201ENST00000349703 SPRR2AP35326 72 aa1.54□□□□□ -2.16
RFC1-201ENST00000349703 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
RFC1-201ENST00000349703 SPRR2EP22531 72 aa1.53□□□□□ -2.16
RFC1-201ENST00000349703 SPRR2BP35325 72 aa1.53□□□□□ -2.16
RFC1-201ENST00000349703 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
RFC1-201ENST00000349703 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
RFC1-201ENST00000349703 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
RFC1-201ENST00000349703 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
RFC1-201ENST00000349703 USH2AO75445 5202 aa1.48□□□□□ -2.17
RFC1-201ENST00000349703 SPRR2DP22532 72 aa1.48□□□□□ -2.17
RFC1-201ENST00000349703 KRTAP5-5Q701N2 237 aaPredicted RBP1.46□□□□□ -2.18
RFC1-201ENST00000349703 KMT2DO14686 5537 aa1.42□□□□□ -2.18
RFC1-201ENST00000349703 KRTAP5-9P26371 169 aa1.41□□□□□ -2.18
RFC1-201ENST00000349703 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.19
RFC1-201ENST00000349703 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
RFC1-201ENST00000349703 LCE1CQ5T751 118 aa1.36□□□□□ -2.19
RFC1-201ENST00000349703 LCE1BQ5T7P3 118 aa1.36□□□□□ -2.19
RFC1-201ENST00000349703 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
RFC1-201ENST00000349703 NEBP20929 6669 aa1.3□□□□□ -2.2
RFC1-201ENST00000349703 MT4P47944 62 aa1.3□□□□□ -2.2
RFC1-201ENST00000349703 FSIP2Q5CZC0 6907 aa1.28□□□□□ -2.2
RFC1-201ENST00000349703 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
RFC1-201ENST00000349703 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
RFC1-201ENST00000349703 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
RFC1-201ENST00000349703 MUC12Q9UKN1 5478 aa1.23□□□□□ -2.21
RFC1-201ENST00000349703 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
RFC1-201ENST00000349703 MDN1Q9NU22 5596 aa1.19□□□□□ -2.22
RFC1-201ENST00000349703 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
RFC1-201ENST00000349703 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
RFC1-201ENST00000349703 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.23
RFC1-201ENST00000349703 KRTAP5-1Q6L8H4 278 aa1.09□□□□□ -2.24
RFC1-201ENST00000349703 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
RFC1-201ENST00000349703 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
RFC1-201ENST00000349703 KRTAP5-8O75690 187 aa1.02□□□□□ -2.25
RFC1-201ENST00000349703 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
RFC1-201ENST00000349703 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
RFC1-201ENST00000349703 MUC5BQ9HC84 5762 aaPredicted RBP0.94□□□□□ -2.26
RFC1-201ENST00000349703 KRTAP5-7Q6L8G8 165 aa0.91□□□□□ -2.26
RFC1-201ENST00000349703 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.26
RFC1-201ENST00000349703 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
RFC1-201ENST00000349703 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms