RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
RNF41-201ENST00000345093 EPPK1P58107 5090 aaKnown RBP3.21□□□□□ -1.9
RNF41-201ENST00000345093 MT3P25713 68 aa3.2□□□□□ -1.9
RNF41-201ENST00000345093 MT1MQ8N339 61 aa3.18□□□□□ -1.9
RNF41-201ENST00000345093 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
RNF41-201ENST00000345093 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
RNF41-201ENST00000345093 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
RNF41-201ENST00000345093 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
RNF41-201ENST00000345093 LPAP08519 4548 aa3.13□□□□□ -1.91
RNF41-201ENST00000345093 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
RNF41-201ENST00000345093 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
RNF41-201ENST00000345093 MT4P47944 62 aa3.11□□□□□ -1.91
RNF41-201ENST00000345093 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
RNF41-201ENST00000345093 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
RNF41-201ENST00000345093 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
RNF41-201ENST00000345093 MT1AP04731 61 aa3.02□□□□□ -1.93
RNF41-201ENST00000345093 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
RNF41-201ENST00000345093 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
RNF41-201ENST00000345093 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.94
RNF41-201ENST00000345093 HMCN2Q8NDA2 5059 aa2.9□□□□□ -1.94
RNF41-201ENST00000345093 KRTAP4-7Q9BYR0 210 aa2.88□□□□□ -1.95
RNF41-201ENST00000345093 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
RNF41-201ENST00000345093 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
RNF41-201ENST00000345093 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
RNF41-201ENST00000345093 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
RNF41-201ENST00000345093 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
RNF41-201ENST00000345093 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
RNF41-201ENST00000345093 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
RNF41-201ENST00000345093 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
RNF41-201ENST00000345093 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
RNF41-201ENST00000345093 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
RNF41-201ENST00000345093 MUC2Q02817 5179 aa2.74□□□□□ -1.97
RNF41-201ENST00000345093 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
RNF41-201ENST00000345093 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
RNF41-201ENST00000345093 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
RNF41-201ENST00000345093 PRM1P04553 51 aa2.69□□□□□ -1.98
RNF41-201ENST00000345093 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
RNF41-201ENST00000345093 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
RNF41-201ENST00000345093 NEBP20929 6669 aa2.63□□□□□ -1.99
RNF41-201ENST00000345093 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
RNF41-201ENST00000345093 SSPOA2VEC9 5147 aa2.55□□□□□ -2
RNF41-201ENST00000345093 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2.01
RNF41-201ENST00000345093 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
RNF41-201ENST00000345093 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
RNF41-201ENST00000345093 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
RNF41-201ENST00000345093 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
RNF41-201ENST00000345093 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
RNF41-201ENST00000345093 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
RNF41-201ENST00000345093 KMT2DO14686 5537 aa2.41□□□□□ -2.02
RNF41-201ENST00000345093 USH2AO75445 5202 aa2.38□□□□□ -2.03
RNF41-201ENST00000345093 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
RNF41-201ENST00000345093 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
RNF41-201ENST00000345093 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
RNF41-201ENST00000345093 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
RNF41-201ENST00000345093 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
RNF41-201ENST00000345093 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
RNF41-201ENST00000345093 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
RNF41-201ENST00000345093 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
RNF41-201ENST00000345093 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
RNF41-201ENST00000345093 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
RNF41-201ENST00000345093 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
RNF41-201ENST00000345093 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
RNF41-201ENST00000345093 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
RNF41-201ENST00000345093 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
RNF41-201ENST00000345093 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
RNF41-201ENST00000345093 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
RNF41-201ENST00000345093 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
RNF41-201ENST00000345093 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
RNF41-201ENST00000345093 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
RNF41-201ENST00000345093 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
RNF41-201ENST00000345093 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
RNF41-201ENST00000345093 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
RNF41-201ENST00000345093 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
RNF41-201ENST00000345093 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
RNF41-201ENST00000345093 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
RNF41-201ENST00000345093 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
RNF41-201ENST00000345093 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 97.5 ms