RNA–Protein interactions for RNA: ENST00000344691.8

RUNX1-202, Transcript of runt related transcription factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1, Length 7,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-202ENST00000344691 KRTAP19-6Q3LI70 58 aa4.57□□□□□ -1.68
RUNX1-202ENST00000344691 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
RUNX1-202ENST00000344691 BIRC6Q9NR09 4857 aa4.49□□□□□ -1.69
RUNX1-202ENST00000344691 MUC17Q685J3 4493 aa4.45□□□□□ -1.7
RUNX1-202ENST00000344691 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
RUNX1-202ENST00000344691 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
RUNX1-202ENST00000344691 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
RUNX1-202ENST00000344691 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
RUNX1-202ENST00000344691 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
RUNX1-202ENST00000344691 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
RUNX1-202ENST00000344691 ABCA13Q86UQ4 5058 aa4.38□□□□□ -1.71
RUNX1-202ENST00000344691 KMT2CQ8NEZ4 4911 aaKnown RBP4.35□□□□□ -1.71
RUNX1-202ENST00000344691 HERC2O95714 4834 aa4.34□□□□□ -1.72
RUNX1-202ENST00000344691 HERC1Q15751 4861 aa4.33□□□□□ -1.72
RUNX1-202ENST00000344691 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
RUNX1-202ENST00000344691 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
RUNX1-202ENST00000344691 KRTAP19-2Q3LHN2 52 aa4.31□□□□□ -1.72
RUNX1-202ENST00000344691 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
RUNX1-202ENST00000344691 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
RUNX1-202ENST00000344691 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
RUNX1-202ENST00000344691 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
RUNX1-202ENST00000344691 EPPK1P58107 5090 aaKnown RBP4.19□□□□□ -1.74
RUNX1-202ENST00000344691 MT1AP04731 61 aa4.17□□□□□ -1.74
RUNX1-202ENST00000344691 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
RUNX1-202ENST00000344691 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.74
RUNX1-202ENST00000344691 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
RUNX1-202ENST00000344691 RNF213Q63HN8 5207 aa4.12□□□□□ -1.75
RUNX1-202ENST00000344691 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
RUNX1-202ENST00000344691 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
RUNX1-202ENST00000344691 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
RUNX1-202ENST00000344691 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
RUNX1-202ENST00000344691 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
RUNX1-202ENST00000344691 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
RUNX1-202ENST00000344691 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
RUNX1-202ENST00000344691 MUC2Q02817 5179 aa3.88□□□□□ -1.79
RUNX1-202ENST00000344691 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
RUNX1-202ENST00000344691 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
RUNX1-202ENST00000344691 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
RUNX1-202ENST00000344691 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
RUNX1-202ENST00000344691 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
RUNX1-202ENST00000344691 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
RUNX1-202ENST00000344691 KMT2DO14686 5537 aa3.7□□□□□ -1.82
RUNX1-202ENST00000344691 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
RUNX1-202ENST00000344691 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.83
RUNX1-202ENST00000344691 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
RUNX1-202ENST00000344691 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
RUNX1-202ENST00000344691 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
RUNX1-202ENST00000344691 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
RUNX1-202ENST00000344691 USH2AO75445 5202 aa3.55□□□□□ -1.84
RUNX1-202ENST00000344691 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
RUNX1-202ENST00000344691 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
RUNX1-202ENST00000344691 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
RUNX1-202ENST00000344691 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
RUNX1-202ENST00000344691 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
RUNX1-202ENST00000344691 NEBP20929 6669 aa3.02□□□□□ -1.93
RUNX1-202ENST00000344691 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
RUNX1-202ENST00000344691 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
RUNX1-202ENST00000344691 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
RUNX1-202ENST00000344691 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
RUNX1-202ENST00000344691 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
RUNX1-202ENST00000344691 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
RUNX1-202ENST00000344691 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
RUNX1-202ENST00000344691 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
RUNX1-202ENST00000344691 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
RUNX1-202ENST00000344691 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
RUNX1-202ENST00000344691 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
RUNX1-202ENST00000344691 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
RUNX1-202ENST00000344691 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
RUNX1-202ENST00000344691 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
RUNX1-202ENST00000344691 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
RUNX1-202ENST00000344691 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
RUNX1-202ENST00000344691 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
RUNX1-202ENST00000344691 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
RUNX1-202ENST00000344691 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
RUNX1-202ENST00000344691 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
RUNX1-202ENST00000344691 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
RUNX1-202ENST00000344691 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms