RNA–Protein interactions for RNA: ENST00000344297.8

ATP7B-202, Transcript of ATPase copper transporting beta, humanhuman

TSL 5 BASIC

Gene ATP7B, Length 5,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-202ENST00000344297 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
ATP7B-202ENST00000344297 ABCA13Q86UQ4 5058 aa4.2□□□□□ -1.74
ATP7B-202ENST00000344297 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
ATP7B-202ENST00000344297 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
ATP7B-202ENST00000344297 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
ATP7B-202ENST00000344297 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
ATP7B-202ENST00000344297 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
ATP7B-202ENST00000344297 MT3P25713 68 aa4.12□□□□□ -1.75
ATP7B-202ENST00000344297 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
ATP7B-202ENST00000344297 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
ATP7B-202ENST00000344297 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
ATP7B-202ENST00000344297 FAT4Q6V0I7 4981 aa4.03□□□□□ -1.76
ATP7B-202ENST00000344297 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
ATP7B-202ENST00000344297 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
ATP7B-202ENST00000344297 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
ATP7B-202ENST00000344297 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
ATP7B-202ENST00000344297 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
ATP7B-202ENST00000344297 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
ATP7B-202ENST00000344297 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
ATP7B-202ENST00000344297 MT1AP04731 61 aa3.92□□□□□ -1.78
ATP7B-202ENST00000344297 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.78
ATP7B-202ENST00000344297 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
ATP7B-202ENST00000344297 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
ATP7B-202ENST00000344297 PRM1P04553 51 aa3.85□□□□□ -1.79
ATP7B-202ENST00000344297 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
ATP7B-202ENST00000344297 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
ATP7B-202ENST00000344297 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
ATP7B-202ENST00000344297 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
ATP7B-202ENST00000344297 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
ATP7B-202ENST00000344297 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
ATP7B-202ENST00000344297 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
ATP7B-202ENST00000344297 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
ATP7B-202ENST00000344297 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
ATP7B-202ENST00000344297 MUC2Q02817 5179 aa3.44□□□□□ -1.86
ATP7B-202ENST00000344297 NEBP20929 6669 aa3.42□□□□□ -1.86
ATP7B-202ENST00000344297 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
ATP7B-202ENST00000344297 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
ATP7B-202ENST00000344297 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
ATP7B-202ENST00000344297 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
ATP7B-202ENST00000344297 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
ATP7B-202ENST00000344297 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
ATP7B-202ENST00000344297 USH2AO75445 5202 aa3.24□□□□□ -1.89
ATP7B-202ENST00000344297 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
ATP7B-202ENST00000344297 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
ATP7B-202ENST00000344297 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
ATP7B-202ENST00000344297 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
ATP7B-202ENST00000344297 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
ATP7B-202ENST00000344297 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
ATP7B-202ENST00000344297 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
ATP7B-202ENST00000344297 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
ATP7B-202ENST00000344297 KMT2DO14686 5537 aa2.79□□□□□ -1.96
ATP7B-202ENST00000344297 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.97
ATP7B-202ENST00000344297 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
ATP7B-202ENST00000344297 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
ATP7B-202ENST00000344297 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
ATP7B-202ENST00000344297 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.97
ATP7B-202ENST00000344297 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
ATP7B-202ENST00000344297 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
ATP7B-202ENST00000344297 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
ATP7B-202ENST00000344297 MUC12Q9UKN1 5478 aa2.57□□□□□ -2
ATP7B-202ENST00000344297 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
ATP7B-202ENST00000344297 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
ATP7B-202ENST00000344297 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
ATP7B-202ENST00000344297 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
ATP7B-202ENST00000344297 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
ATP7B-202ENST00000344297 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
ATP7B-202ENST00000344297 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
ATP7B-202ENST00000344297 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
ATP7B-202ENST00000344297 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
ATP7B-202ENST00000344297 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
ATP7B-202ENST00000344297 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
ATP7B-202ENST00000344297 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
ATP7B-202ENST00000344297 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
ATP7B-202ENST00000344297 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
ATP7B-202ENST00000344297 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
ATP7B-202ENST00000344297 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
ATP7B-202ENST00000344297 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms