RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
SEMA6A-202ENST00000343348 HERC2O95714 4834 aa3.49□□□□□ -1.85
SEMA6A-202ENST00000343348 RYR2Q92736 4967 aa3.47□□□□□ -1.85
SEMA6A-202ENST00000343348 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
SEMA6A-202ENST00000343348 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
SEMA6A-202ENST00000343348 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
SEMA6A-202ENST00000343348 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
SEMA6A-202ENST00000343348 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
SEMA6A-202ENST00000343348 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
SEMA6A-202ENST00000343348 HERC1Q15751 4861 aa3.4□□□□□ -1.87
SEMA6A-202ENST00000343348 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
SEMA6A-202ENST00000343348 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
SEMA6A-202ENST00000343348 LCE2AQ5TA79 106 aaPredicted RBP3.39□□□□□ -1.87
SEMA6A-202ENST00000343348 MT1AP04731 61 aa3.38□□□□□ -1.87
SEMA6A-202ENST00000343348 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
SEMA6A-202ENST00000343348 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
SEMA6A-202ENST00000343348 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
SEMA6A-202ENST00000343348 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
SEMA6A-202ENST00000343348 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
SEMA6A-202ENST00000343348 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SEMA6A-202ENST00000343348 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
SEMA6A-202ENST00000343348 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
SEMA6A-202ENST00000343348 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
SEMA6A-202ENST00000343348 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
SEMA6A-202ENST00000343348 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
SEMA6A-202ENST00000343348 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
SEMA6A-202ENST00000343348 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
SEMA6A-202ENST00000343348 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
SEMA6A-202ENST00000343348 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
SEMA6A-202ENST00000343348 MUC2Q02817 5179 aa3.06□□□□□ -1.92
SEMA6A-202ENST00000343348 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
SEMA6A-202ENST00000343348 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
SEMA6A-202ENST00000343348 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
SEMA6A-202ENST00000343348 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
SEMA6A-202ENST00000343348 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
SEMA6A-202ENST00000343348 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
SEMA6A-202ENST00000343348 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
SEMA6A-202ENST00000343348 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
SEMA6A-202ENST00000343348 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
SEMA6A-202ENST00000343348 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
SEMA6A-202ENST00000343348 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
SEMA6A-202ENST00000343348 KMT2DO14686 5537 aa2.79□□□□□ -1.96
SEMA6A-202ENST00000343348 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
SEMA6A-202ENST00000343348 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
SEMA6A-202ENST00000343348 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SEMA6A-202ENST00000343348 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
SEMA6A-202ENST00000343348 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
SEMA6A-202ENST00000343348 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
SEMA6A-202ENST00000343348 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
SEMA6A-202ENST00000343348 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
SEMA6A-202ENST00000343348 USH2AO75445 5202 aa2.54□□□□□ -2
SEMA6A-202ENST00000343348 NEBP20929 6669 aa2.51□□□□□ -2.01
SEMA6A-202ENST00000343348 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
SEMA6A-202ENST00000343348 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
SEMA6A-202ENST00000343348 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
SEMA6A-202ENST00000343348 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
SEMA6A-202ENST00000343348 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
SEMA6A-202ENST00000343348 KRTAP5-4Q6L8H1 288 aa2.23□□□□□ -2.05
SEMA6A-202ENST00000343348 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
SEMA6A-202ENST00000343348 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
SEMA6A-202ENST00000343348 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
SEMA6A-202ENST00000343348 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
SEMA6A-202ENST00000343348 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
SEMA6A-202ENST00000343348 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
SEMA6A-202ENST00000343348 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
SEMA6A-202ENST00000343348 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
SEMA6A-202ENST00000343348 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
SEMA6A-202ENST00000343348 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
SEMA6A-202ENST00000343348 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
SEMA6A-202ENST00000343348 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
SEMA6A-202ENST00000343348 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
SEMA6A-202ENST00000343348 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.17
SEMA6A-202ENST00000343348 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
SEMA6A-202ENST00000343348 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SEMA6A-202ENST00000343348 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
SEMA6A-202ENST00000343348 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
SEMA6A-202ENST00000343348 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms