RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 MT1EP04732 61 aa5.02□□□□□ -1.61
PCDHB13-201ENST00000341948 MT1LQ93083 61 aa5.01□□□□□ -1.61
PCDHB13-201ENST00000341948 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
PCDHB13-201ENST00000341948 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
PCDHB13-201ENST00000341948 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
PCDHB13-201ENST00000341948 MUC2Q02817 5179 aa4.9□□□□□ -1.62
PCDHB13-201ENST00000341948 MT1MQ8N339 61 aa4.86□□□□□ -1.63
PCDHB13-201ENST00000341948 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
PCDHB13-201ENST00000341948 MT4P47944 62 aa4.75□□□□□ -1.65
PCDHB13-201ENST00000341948 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
PCDHB13-201ENST00000341948 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
PCDHB13-201ENST00000341948 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
PCDHB13-201ENST00000341948 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
PCDHB13-201ENST00000341948 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
PCDHB13-201ENST00000341948 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
PCDHB13-201ENST00000341948 MT3P25713 68 aa4.62□□□□□ -1.67
PCDHB13-201ENST00000341948 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.68
PCDHB13-201ENST00000341948 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
PCDHB13-201ENST00000341948 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
PCDHB13-201ENST00000341948 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
PCDHB13-201ENST00000341948 MT1AP04731 61 aa4.45□□□□□ -1.7
PCDHB13-201ENST00000341948 USH2AO75445 5202 aa4.42□□□□□ -1.7
PCDHB13-201ENST00000341948 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
PCDHB13-201ENST00000341948 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
PCDHB13-201ENST00000341948 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
PCDHB13-201ENST00000341948 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
PCDHB13-201ENST00000341948 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
PCDHB13-201ENST00000341948 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
PCDHB13-201ENST00000341948 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
PCDHB13-201ENST00000341948 PRM1P04553 51 aa4.31□□□□□ -1.72
PCDHB13-201ENST00000341948 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
PCDHB13-201ENST00000341948 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.73
PCDHB13-201ENST00000341948 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
PCDHB13-201ENST00000341948 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
PCDHB13-201ENST00000341948 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
PCDHB13-201ENST00000341948 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.73
PCDHB13-201ENST00000341948 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
PCDHB13-201ENST00000341948 KMT2DO14686 5537 aa4.21□□□□□ -1.74
PCDHB13-201ENST00000341948 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
PCDHB13-201ENST00000341948 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
PCDHB13-201ENST00000341948 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
PCDHB13-201ENST00000341948 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
PCDHB13-201ENST00000341948 KRTAP5-9P26371 169 aa4□□□□□ -1.77
PCDHB13-201ENST00000341948 NEBP20929 6669 aa3.98□□□□□ -1.77
PCDHB13-201ENST00000341948 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
PCDHB13-201ENST00000341948 MDN1Q9NU22 5596 aa3.9□□□□□ -1.78
PCDHB13-201ENST00000341948 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
PCDHB13-201ENST00000341948 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
PCDHB13-201ENST00000341948 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
PCDHB13-201ENST00000341948 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
PCDHB13-201ENST00000341948 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
PCDHB13-201ENST00000341948 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
PCDHB13-201ENST00000341948 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
PCDHB13-201ENST00000341948 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
PCDHB13-201ENST00000341948 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
PCDHB13-201ENST00000341948 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
PCDHB13-201ENST00000341948 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
PCDHB13-201ENST00000341948 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
PCDHB13-201ENST00000341948 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
PCDHB13-201ENST00000341948 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
PCDHB13-201ENST00000341948 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
PCDHB13-201ENST00000341948 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
PCDHB13-201ENST00000341948 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.93
PCDHB13-201ENST00000341948 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
PCDHB13-201ENST00000341948 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
PCDHB13-201ENST00000341948 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
PCDHB13-201ENST00000341948 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
PCDHB13-201ENST00000341948 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
PCDHB13-201ENST00000341948 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
PCDHB13-201ENST00000341948 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
PCDHB13-201ENST00000341948 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
PCDHB13-201ENST00000341948 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
PCDHB13-201ENST00000341948 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
PCDHB13-201ENST00000341948 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
PCDHB13-201ENST00000341948 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
PCDHB13-201ENST00000341948 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
PCDHB13-201ENST00000341948 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 143.8 ms