RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
SEMA6C-201ENST00000341697 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
SEMA6C-201ENST00000341697 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
SEMA6C-201ENST00000341697 FSIP2Q5CZC0 6907 aa6.36□□□□□ -1.39
SEMA6C-201ENST00000341697 MT1MQ8N339 61 aa6.33□□□□□ -1.4
SEMA6C-201ENST00000341697 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
SEMA6C-201ENST00000341697 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
SEMA6C-201ENST00000341697 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
SEMA6C-201ENST00000341697 LCE3EQ5T5B0 92 aa6.09□□□□□ -1.43
SEMA6C-201ENST00000341697 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
SEMA6C-201ENST00000341697 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
SEMA6C-201ENST00000341697 MUC2Q02817 5179 aa6.04□□□□□ -1.44
SEMA6C-201ENST00000341697 MT4P47944 62 aa6.04□□□□□ -1.44
SEMA6C-201ENST00000341697 MT3P25713 68 aa6□□□□□ -1.45
SEMA6C-201ENST00000341697 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
SEMA6C-201ENST00000341697 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
SEMA6C-201ENST00000341697 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
SEMA6C-201ENST00000341697 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
SEMA6C-201ENST00000341697 MT1AP04731 61 aa5.83□□□□□ -1.48
SEMA6C-201ENST00000341697 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
SEMA6C-201ENST00000341697 KRTAP20-1Q3LI63 56 aa5.77□□□□□ -1.49
SEMA6C-201ENST00000341697 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
SEMA6C-201ENST00000341697 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
SEMA6C-201ENST00000341697 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
SEMA6C-201ENST00000341697 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
SEMA6C-201ENST00000341697 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
SEMA6C-201ENST00000341697 USH2AO75445 5202 aa5.6□□□□□ -1.51
SEMA6C-201ENST00000341697 LCE1DQ5T752 114 aa5.59□□□□□ -1.52
SEMA6C-201ENST00000341697 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
SEMA6C-201ENST00000341697 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
SEMA6C-201ENST00000341697 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
SEMA6C-201ENST00000341697 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
SEMA6C-201ENST00000341697 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
SEMA6C-201ENST00000341697 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
SEMA6C-201ENST00000341697 PRM1P04553 51 aa5.45□□□□□ -1.54
SEMA6C-201ENST00000341697 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.55
SEMA6C-201ENST00000341697 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
SEMA6C-201ENST00000341697 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
SEMA6C-201ENST00000341697 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
SEMA6C-201ENST00000341697 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
SEMA6C-201ENST00000341697 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
SEMA6C-201ENST00000341697 KMT2DO14686 5537 aa5.15□□□□□ -1.59
SEMA6C-201ENST00000341697 SSPOA2VEC9 5147 aa5.1□□□□□ -1.59
SEMA6C-201ENST00000341697 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
SEMA6C-201ENST00000341697 NEBP20929 6669 aa5□□□□□ -1.61
SEMA6C-201ENST00000341697 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.62
SEMA6C-201ENST00000341697 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
SEMA6C-201ENST00000341697 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
SEMA6C-201ENST00000341697 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
SEMA6C-201ENST00000341697 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
SEMA6C-201ENST00000341697 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
SEMA6C-201ENST00000341697 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
SEMA6C-201ENST00000341697 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
SEMA6C-201ENST00000341697 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
SEMA6C-201ENST00000341697 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
SEMA6C-201ENST00000341697 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
SEMA6C-201ENST00000341697 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
SEMA6C-201ENST00000341697 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
SEMA6C-201ENST00000341697 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
SEMA6C-201ENST00000341697 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
SEMA6C-201ENST00000341697 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
SEMA6C-201ENST00000341697 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
SEMA6C-201ENST00000341697 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
SEMA6C-201ENST00000341697 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
SEMA6C-201ENST00000341697 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
SEMA6C-201ENST00000341697 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
SEMA6C-201ENST00000341697 KRTAP5-8O75690 187 aa3.59□□□□□ -1.84
SEMA6C-201ENST00000341697 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
SEMA6C-201ENST00000341697 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SEMA6C-201ENST00000341697 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
SEMA6C-201ENST00000341697 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SEMA6C-201ENST00000341697 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
SEMA6C-201ENST00000341697 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
SEMA6C-201ENST00000341697 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
SEMA6C-201ENST00000341697 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
SEMA6C-201ENST00000341697 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
SEMA6C-201ENST00000341697 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
SEMA6C-201ENST00000341697 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 61.2 ms