RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 KRTAP20-1Q3LI63 56 aa7.61□□□□□ -1.19
AGAP1-202ENST00000336665 SYNE1Q8NF91 8797 aaKnown RBP7.61□□□□□ -1.19
AGAP1-202ENST00000336665 KRTAP4-3Q9BYR4 195 aa7.6□□□□□ -1.19
AGAP1-202ENST00000336665 MT1AP04731 61 aa7.6□□□□□ -1.19
AGAP1-202ENST00000336665 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
AGAP1-202ENST00000336665 MUC17Q685J3 4493 aa7.53□□□□□ -1.2
AGAP1-202ENST00000336665 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
AGAP1-202ENST00000336665 HYDINQ4G0P3 5121 aa7.47□□□□□ -1.21
AGAP1-202ENST00000336665 PKHD1P08F94 4074 aa7.47□□□□□ -1.21
AGAP1-202ENST00000336665 FLGP20930 4061 aaPredicted RBP7.44□□□□□ -1.22
AGAP1-202ENST00000336665 LCE5AQ5TCM9 118 aa7.43□□□□□ -1.22
AGAP1-202ENST00000336665 LPAP08519 4548 aa7.43□□□□□ -1.22
AGAP1-202ENST00000336665 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
AGAP1-202ENST00000336665 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
AGAP1-202ENST00000336665 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
AGAP1-202ENST00000336665 KRTAP6-3Q3LI67 103 aa7.33□□□□□ -1.24
AGAP1-202ENST00000336665 KRTAP2-3P0C7H8 128 aa7.3□□□□□ -1.24
AGAP1-202ENST00000336665 KRTAP2-4Q9BYR9 128 aa7.3□□□□□ -1.24
AGAP1-202ENST00000336665 KRTAP2-1Q9BYU5 128 aa7.3□□□□□ -1.24
AGAP1-202ENST00000336665 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
AGAP1-202ENST00000336665 UBR4Q5T4S7 5183 aa7.18□□□□□ -1.26
AGAP1-202ENST00000336665 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
AGAP1-202ENST00000336665 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
AGAP1-202ENST00000336665 TNXBP22105 4242 aa7.09□□□□□ -1.27
AGAP1-202ENST00000336665 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
AGAP1-202ENST00000336665 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
AGAP1-202ENST00000336665 KRTAP2-2Q9BYT5 123 aa7.02□□□□□ -1.28
AGAP1-202ENST00000336665 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
AGAP1-202ENST00000336665 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
AGAP1-202ENST00000336665 KRTAP6-2Q3LI66 62 aa6.97□□□□□ -1.29
AGAP1-202ENST00000336665 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
AGAP1-202ENST00000336665 MUC2Q02817 5179 aa6.95□□□□□ -1.3
AGAP1-202ENST00000336665 KRTAP6-1Q3LI64 71 aa6.91□□□□□ -1.3
AGAP1-202ENST00000336665 OBSCNQ5VST9 7968 aa6.89□□□□□ -1.31
AGAP1-202ENST00000336665 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
AGAP1-202ENST00000336665 LCE1CQ5T751 118 aa6.84□□□□□ -1.31
AGAP1-202ENST00000336665 LCE1EQ5T753 118 aa6.84□□□□□ -1.31
AGAP1-202ENST00000336665 LCE1FQ5T754 118 aa6.84□□□□□ -1.31
AGAP1-202ENST00000336665 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
AGAP1-202ENST00000336665 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
AGAP1-202ENST00000336665 USH2AO75445 5202 aa6.1□□□□□ -1.43
AGAP1-202ENST00000336665 NEBP20929 6669 aa6□□□□□ -1.45
AGAP1-202ENST00000336665 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
AGAP1-202ENST00000336665 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
AGAP1-202ENST00000336665 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
AGAP1-202ENST00000336665 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
AGAP1-202ENST00000336665 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
AGAP1-202ENST00000336665 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
AGAP1-202ENST00000336665 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
AGAP1-202ENST00000336665 KMT2DO14686 5537 aa5.7□□□□□ -1.5
AGAP1-202ENST00000336665 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
AGAP1-202ENST00000336665 MUC19Q7Z5P9 8384 aa5.59□□□□□ -1.51
AGAP1-202ENST00000336665 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
AGAP1-202ENST00000336665 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.53
AGAP1-202ENST00000336665 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
AGAP1-202ENST00000336665 KRTAP5-4Q6L8H1 288 aa5.38□□□□□ -1.55
AGAP1-202ENST00000336665 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
AGAP1-202ENST00000336665 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
AGAP1-202ENST00000336665 KRTAP4-4Q9BYR3 166 aa5.26□□□□□ -1.57
AGAP1-202ENST00000336665 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
AGAP1-202ENST00000336665 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.65
AGAP1-202ENST00000336665 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
AGAP1-202ENST00000336665 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
AGAP1-202ENST00000336665 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
AGAP1-202ENST00000336665 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
AGAP1-202ENST00000336665 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
AGAP1-202ENST00000336665 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.77
AGAP1-202ENST00000336665 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
AGAP1-202ENST00000336665 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
AGAP1-202ENST00000336665 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
AGAP1-202ENST00000336665 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
AGAP1-202ENST00000336665 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
AGAP1-202ENST00000336665 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
AGAP1-202ENST00000336665 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
AGAP1-202ENST00000336665 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
AGAP1-202ENST00000336665 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
AGAP1-202ENST00000336665 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms