RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 MT3P25713 68 aa5.54□□□□□ -1.52
SYNM-202ENST00000336292 PRM1P04553 51 aa5.51□□□□□ -1.53
SYNM-202ENST00000336292 HERC2O95714 4834 aa5.46□□□□□ -1.53
SYNM-202ENST00000336292 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
SYNM-202ENST00000336292 FSIP2Q5CZC0 6907 aa5.44□□□□□ -1.54
SYNM-202ENST00000336292 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
SYNM-202ENST00000336292 KMT2CQ8NEZ4 4911 aaKnown RBP5.37□□□□□ -1.55
SYNM-202ENST00000336292 KIAA1109Q2LD37 5005 aa5.36□□□□□ -1.55
SYNM-202ENST00000336292 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
SYNM-202ENST00000336292 LCE1EQ5T753 118 aa5.31□□□□□ -1.56
SYNM-202ENST00000336292 LCE1FQ5T754 118 aa5.31□□□□□ -1.56
SYNM-202ENST00000336292 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
SYNM-202ENST00000336292 RYR2Q92736 4967 aa5.27□□□□□ -1.57
SYNM-202ENST00000336292 PCLOQ9Y6V0 5065 aa5.22□□□□□ -1.57
SYNM-202ENST00000336292 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
SYNM-202ENST00000336292 BIRC6Q9NR09 4857 aa5.18□□□□□ -1.58
SYNM-202ENST00000336292 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
SYNM-202ENST00000336292 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
SYNM-202ENST00000336292 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
SYNM-202ENST00000336292 HERC1Q15751 4861 aa5.11□□□□□ -1.59
SYNM-202ENST00000336292 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
SYNM-202ENST00000336292 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
SYNM-202ENST00000336292 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
SYNM-202ENST00000336292 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
SYNM-202ENST00000336292 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
SYNM-202ENST00000336292 MT1AP04731 61 aa4.98□□□□□ -1.61
SYNM-202ENST00000336292 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
SYNM-202ENST00000336292 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
SYNM-202ENST00000336292 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
SYNM-202ENST00000336292 MUC2Q02817 5179 aa4.8□□□□□ -1.64
SYNM-202ENST00000336292 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
SYNM-202ENST00000336292 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
SYNM-202ENST00000336292 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
SYNM-202ENST00000336292 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
SYNM-202ENST00000336292 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
SYNM-202ENST00000336292 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
SYNM-202ENST00000336292 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
SYNM-202ENST00000336292 UBR4Q5T4S7 5183 aa4.48□□□□□ -1.69
SYNM-202ENST00000336292 KMT2DO14686 5537 aa4.42□□□□□ -1.7
SYNM-202ENST00000336292 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
SYNM-202ENST00000336292 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
SYNM-202ENST00000336292 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
SYNM-202ENST00000336292 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
SYNM-202ENST00000336292 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
SYNM-202ENST00000336292 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
SYNM-202ENST00000336292 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
SYNM-202ENST00000336292 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
SYNM-202ENST00000336292 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SYNM-202ENST00000336292 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
SYNM-202ENST00000336292 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
SYNM-202ENST00000336292 NEBP20929 6669 aa3.91□□□□□ -1.78
SYNM-202ENST00000336292 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
SYNM-202ENST00000336292 USH2AO75445 5202 aa3.74□□□□□ -1.81
SYNM-202ENST00000336292 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
SYNM-202ENST00000336292 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
SYNM-202ENST00000336292 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
SYNM-202ENST00000336292 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
SYNM-202ENST00000336292 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
SYNM-202ENST00000336292 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
SYNM-202ENST00000336292 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
SYNM-202ENST00000336292 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
SYNM-202ENST00000336292 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
SYNM-202ENST00000336292 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SYNM-202ENST00000336292 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SYNM-202ENST00000336292 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
SYNM-202ENST00000336292 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
SYNM-202ENST00000336292 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
SYNM-202ENST00000336292 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
SYNM-202ENST00000336292 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
SYNM-202ENST00000336292 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
SYNM-202ENST00000336292 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
SYNM-202ENST00000336292 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SYNM-202ENST00000336292 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SYNM-202ENST00000336292 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
SYNM-202ENST00000336292 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
SYNM-202ENST00000336292 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
SYNM-202ENST00000336292 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 86.1 ms