RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 RYR2Q92736 4967 aa4.69□□□□□ -1.66
PDZD8-201ENST00000334464 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
PDZD8-201ENST00000334464 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.66
PDZD8-201ENST00000334464 HERC2O95714 4834 aa4.64□□□□□ -1.67
PDZD8-201ENST00000334464 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
PDZD8-201ENST00000334464 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
PDZD8-201ENST00000334464 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
PDZD8-201ENST00000334464 KMT2CQ8NEZ4 4911 aaKnown RBP4.58□□□□□ -1.68
PDZD8-201ENST00000334464 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
PDZD8-201ENST00000334464 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
PDZD8-201ENST00000334464 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
PDZD8-201ENST00000334464 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
PDZD8-201ENST00000334464 KIAA1109Q2LD37 5005 aa4.46□□□□□ -1.7
PDZD8-201ENST00000334464 LPAP08519 4548 aa4.45□□□□□ -1.7
PDZD8-201ENST00000334464 HERC1Q15751 4861 aa4.44□□□□□ -1.7
PDZD8-201ENST00000334464 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
PDZD8-201ENST00000334464 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
PDZD8-201ENST00000334464 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
PDZD8-201ENST00000334464 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
PDZD8-201ENST00000334464 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
PDZD8-201ENST00000334464 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
PDZD8-201ENST00000334464 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
PDZD8-201ENST00000334464 HYDINQ4G0P3 5121 aa4.32□□□□□ -1.72
PDZD8-201ENST00000334464 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
PDZD8-201ENST00000334464 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
PDZD8-201ENST00000334464 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
PDZD8-201ENST00000334464 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.73
PDZD8-201ENST00000334464 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
PDZD8-201ENST00000334464 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
PDZD8-201ENST00000334464 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
PDZD8-201ENST00000334464 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
PDZD8-201ENST00000334464 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
PDZD8-201ENST00000334464 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
PDZD8-201ENST00000334464 HMCN2Q8NDA2 5059 aa3.94□□□□□ -1.78
PDZD8-201ENST00000334464 MUC2Q02817 5179 aa3.88□□□□□ -1.79
PDZD8-201ENST00000334464 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
PDZD8-201ENST00000334464 UBR4Q5T4S7 5183 aa3.78□□□□□ -1.8
PDZD8-201ENST00000334464 FAT4Q6V0I7 4981 aa3.74□□□□□ -1.81
PDZD8-201ENST00000334464 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
PDZD8-201ENST00000334464 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
PDZD8-201ENST00000334464 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
PDZD8-201ENST00000334464 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
PDZD8-201ENST00000334464 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
PDZD8-201ENST00000334464 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
PDZD8-201ENST00000334464 NEBP20929 6669 aa3.39□□□□□ -1.87
PDZD8-201ENST00000334464 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
PDZD8-201ENST00000334464 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
PDZD8-201ENST00000334464 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
PDZD8-201ENST00000334464 USH2AO75445 5202 aa3.24□□□□□ -1.89
PDZD8-201ENST00000334464 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
PDZD8-201ENST00000334464 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
PDZD8-201ENST00000334464 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
PDZD8-201ENST00000334464 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
PDZD8-201ENST00000334464 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
PDZD8-201ENST00000334464 KMT2DO14686 5537 aa3.1□□□□□ -1.91
PDZD8-201ENST00000334464 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
PDZD8-201ENST00000334464 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
PDZD8-201ENST00000334464 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
PDZD8-201ENST00000334464 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
PDZD8-201ENST00000334464 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
PDZD8-201ENST00000334464 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
PDZD8-201ENST00000334464 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
PDZD8-201ENST00000334464 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -2
PDZD8-201ENST00000334464 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
PDZD8-201ENST00000334464 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
PDZD8-201ENST00000334464 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
PDZD8-201ENST00000334464 KRTAP5-8O75690 187 aa2.53□□□□□ -2.01
PDZD8-201ENST00000334464 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
PDZD8-201ENST00000334464 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
PDZD8-201ENST00000334464 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
PDZD8-201ENST00000334464 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
PDZD8-201ENST00000334464 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
PDZD8-201ENST00000334464 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
PDZD8-201ENST00000334464 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PDZD8-201ENST00000334464 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
PDZD8-201ENST00000334464 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
PDZD8-201ENST00000334464 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms