RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 MT1AP04731 61 aa3.78□□□□□ -1.8
PCM1-202ENST00000327578 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
PCM1-202ENST00000327578 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
PCM1-202ENST00000327578 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
PCM1-202ENST00000327578 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
PCM1-202ENST00000327578 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
PCM1-202ENST00000327578 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
PCM1-202ENST00000327578 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
PCM1-202ENST00000327578 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
PCM1-202ENST00000327578 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
PCM1-202ENST00000327578 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
PCM1-202ENST00000327578 RYR3Q15413 4870 aa3.66□□□□□ -1.82
PCM1-202ENST00000327578 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
PCM1-202ENST00000327578 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
PCM1-202ENST00000327578 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
PCM1-202ENST00000327578 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
PCM1-202ENST00000327578 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
PCM1-202ENST00000327578 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
PCM1-202ENST00000327578 HYDINQ4G0P3 5121 aa3.44□□□□□ -1.86
PCM1-202ENST00000327578 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
PCM1-202ENST00000327578 HERC2O95714 4834 aa3.4□□□□□ -1.87
PCM1-202ENST00000327578 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
PCM1-202ENST00000327578 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
PCM1-202ENST00000327578 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
PCM1-202ENST00000327578 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
PCM1-202ENST00000327578 RYR2Q92736 4967 aa3.19□□□□□ -1.9
PCM1-202ENST00000327578 BIRC6Q9NR09 4857 aa3.18□□□□□ -1.9
PCM1-202ENST00000327578 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
PCM1-202ENST00000327578 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
PCM1-202ENST00000327578 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
PCM1-202ENST00000327578 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
PCM1-202ENST00000327578 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
PCM1-202ENST00000327578 HERC1Q15751 4861 aa2.99□□□□□ -1.93
PCM1-202ENST00000327578 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
PCM1-202ENST00000327578 PCLOQ9Y6V0 5065 aa2.92□□□□□ -1.94
PCM1-202ENST00000327578 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
PCM1-202ENST00000327578 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
PCM1-202ENST00000327578 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
PCM1-202ENST00000327578 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
PCM1-202ENST00000327578 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
PCM1-202ENST00000327578 KMT2DO14686 5537 aa2.73□□□□□ -1.97
PCM1-202ENST00000327578 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
PCM1-202ENST00000327578 MUC2Q02817 5179 aa2.69□□□□□ -1.98
PCM1-202ENST00000327578 EPPK1P58107 5090 aaKnown RBP2.69□□□□□ -1.98
PCM1-202ENST00000327578 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
PCM1-202ENST00000327578 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
PCM1-202ENST00000327578 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
PCM1-202ENST00000327578 KRTAP5-9P26371 169 aa2.54□□□□□ -2
PCM1-202ENST00000327578 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
PCM1-202ENST00000327578 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
PCM1-202ENST00000327578 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
PCM1-202ENST00000327578 NEBP20929 6669 aa2.43□□□□□ -2.02
PCM1-202ENST00000327578 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
PCM1-202ENST00000327578 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.03
PCM1-202ENST00000327578 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
PCM1-202ENST00000327578 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
PCM1-202ENST00000327578 PHGR1C9JFL3 82 aa2.15□□□□□ -2.06
PCM1-202ENST00000327578 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
PCM1-202ENST00000327578 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
PCM1-202ENST00000327578 USH2AO75445 5202 aa2.1□□□□□ -2.07
PCM1-202ENST00000327578 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
PCM1-202ENST00000327578 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
PCM1-202ENST00000327578 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
PCM1-202ENST00000327578 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
PCM1-202ENST00000327578 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
PCM1-202ENST00000327578 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
PCM1-202ENST00000327578 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
PCM1-202ENST00000327578 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
PCM1-202ENST00000327578 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
PCM1-202ENST00000327578 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
PCM1-202ENST00000327578 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
PCM1-202ENST00000327578 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
PCM1-202ENST00000327578 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
PCM1-202ENST00000327578 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
PCM1-202ENST00000327578 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.19
PCM1-202ENST00000327578 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
PCM1-202ENST00000327578 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 9.9 ms