RNA–Protein interactions for RNA: ENST00000316851.11

NCAM1-201, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-201ENST00000316851 LCE2DQ5TA82 110 aaPredicted RBP3.31□□□□□ -1.88
NCAM1-201ENST00000316851 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
NCAM1-201ENST00000316851 MT1MQ8N339 61 aa3.26□□□□□ -1.89
NCAM1-201ENST00000316851 PRM1P04553 51 aa3.25□□□□□ -1.89
NCAM1-201ENST00000316851 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
NCAM1-201ENST00000316851 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
NCAM1-201ENST00000316851 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
NCAM1-201ENST00000316851 MT1AP04731 61 aa3.12□□□□□ -1.91
NCAM1-201ENST00000316851 MT4P47944 62 aa3.11□□□□□ -1.91
NCAM1-201ENST00000316851 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
NCAM1-201ENST00000316851 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
NCAM1-201ENST00000316851 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
NCAM1-201ENST00000316851 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
NCAM1-201ENST00000316851 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
NCAM1-201ENST00000316851 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
NCAM1-201ENST00000316851 FSIP2Q5CZC0 6907 aa3.01□□□□□ -1.93
NCAM1-201ENST00000316851 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
NCAM1-201ENST00000316851 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
NCAM1-201ENST00000316851 USH2AO75445 5202 aa2.98□□□□□ -1.93
NCAM1-201ENST00000316851 KRTAP9-2Q9BYQ4 174 aa2.95□□□□□ -1.94
NCAM1-201ENST00000316851 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
NCAM1-201ENST00000316851 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
NCAM1-201ENST00000316851 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.94
NCAM1-201ENST00000316851 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
NCAM1-201ENST00000316851 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
NCAM1-201ENST00000316851 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
NCAM1-201ENST00000316851 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
NCAM1-201ENST00000316851 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
NCAM1-201ENST00000316851 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
NCAM1-201ENST00000316851 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
NCAM1-201ENST00000316851 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
NCAM1-201ENST00000316851 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
NCAM1-201ENST00000316851 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
NCAM1-201ENST00000316851 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
NCAM1-201ENST00000316851 KMT2DO14686 5537 aa2.67□□□□□ -1.98
NCAM1-201ENST00000316851 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
NCAM1-201ENST00000316851 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
NCAM1-201ENST00000316851 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
NCAM1-201ENST00000316851 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
NCAM1-201ENST00000316851 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
NCAM1-201ENST00000316851 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
NCAM1-201ENST00000316851 MACF1Q9UPN3 7388 aaKnown RBP2.58□□□□□ -2
NCAM1-201ENST00000316851 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
NCAM1-201ENST00000316851 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
NCAM1-201ENST00000316851 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
NCAM1-201ENST00000316851 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
NCAM1-201ENST00000316851 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
NCAM1-201ENST00000316851 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
NCAM1-201ENST00000316851 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
NCAM1-201ENST00000316851 KRTAP4-6Q9BYQ5 205 aa2.35□□□□□ -2.03
NCAM1-201ENST00000316851 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
NCAM1-201ENST00000316851 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
NCAM1-201ENST00000316851 NEBP20929 6669 aa2.24□□□□□ -2.05
NCAM1-201ENST00000316851 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
NCAM1-201ENST00000316851 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
NCAM1-201ENST00000316851 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.07
NCAM1-201ENST00000316851 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.08
NCAM1-201ENST00000316851 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
NCAM1-201ENST00000316851 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
NCAM1-201ENST00000316851 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
NCAM1-201ENST00000316851 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
NCAM1-201ENST00000316851 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
NCAM1-201ENST00000316851 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
NCAM1-201ENST00000316851 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
NCAM1-201ENST00000316851 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
NCAM1-201ENST00000316851 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
NCAM1-201ENST00000316851 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
NCAM1-201ENST00000316851 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
NCAM1-201ENST00000316851 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
NCAM1-201ENST00000316851 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
NCAM1-201ENST00000316851 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
NCAM1-201ENST00000316851 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
NCAM1-201ENST00000316851 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
NCAM1-201ENST00000316851 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
NCAM1-201ENST00000316851 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
NCAM1-201ENST00000316851 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
NCAM1-201ENST00000316851 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms