RNA–Protein interactions for RNA: ENST00000315480.8

USP20-201, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-201ENST00000315480 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
USP20-201ENST00000315480 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
USP20-201ENST00000315480 MT1MQ8N339 61 aa4.17□□□□□ -1.74
USP20-201ENST00000315480 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
USP20-201ENST00000315480 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
USP20-201ENST00000315480 KRTAP4-7Q9BYR0 210 aa4.13□□□□□ -1.75
USP20-201ENST00000315480 MT3P25713 68 aa4.12□□□□□ -1.75
USP20-201ENST00000315480 MUC2Q02817 5179 aa4.12□□□□□ -1.75
USP20-201ENST00000315480 TNXBP22105 4242 aa4.11□□□□□ -1.75
USP20-201ENST00000315480 MT4P47944 62 aa4.07□□□□□ -1.76
USP20-201ENST00000315480 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
USP20-201ENST00000315480 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
USP20-201ENST00000315480 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
USP20-201ENST00000315480 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
USP20-201ENST00000315480 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.77
USP20-201ENST00000315480 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
USP20-201ENST00000315480 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
USP20-201ENST00000315480 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
USP20-201ENST00000315480 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
USP20-201ENST00000315480 MT1AP04731 61 aa3.9□□□□□ -1.79
USP20-201ENST00000315480 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
USP20-201ENST00000315480 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
USP20-201ENST00000315480 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
USP20-201ENST00000315480 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
USP20-201ENST00000315480 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
USP20-201ENST00000315480 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
USP20-201ENST00000315480 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
USP20-201ENST00000315480 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
USP20-201ENST00000315480 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
USP20-201ENST00000315480 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
USP20-201ENST00000315480 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
USP20-201ENST00000315480 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
USP20-201ENST00000315480 PRM1P04553 51 aa3.71□□□□□ -1.82
USP20-201ENST00000315480 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
USP20-201ENST00000315480 KMT2DO14686 5537 aa3.68□□□□□ -1.82
USP20-201ENST00000315480 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
USP20-201ENST00000315480 USH2AO75445 5202 aa3.63□□□□□ -1.83
USP20-201ENST00000315480 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
USP20-201ENST00000315480 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
USP20-201ENST00000315480 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
USP20-201ENST00000315480 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
USP20-201ENST00000315480 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
USP20-201ENST00000315480 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
USP20-201ENST00000315480 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
USP20-201ENST00000315480 NEBP20929 6669 aa3.33□□□□□ -1.88
USP20-201ENST00000315480 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
USP20-201ENST00000315480 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
USP20-201ENST00000315480 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
USP20-201ENST00000315480 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
USP20-201ENST00000315480 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
USP20-201ENST00000315480 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
USP20-201ENST00000315480 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
USP20-201ENST00000315480 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
USP20-201ENST00000315480 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
USP20-201ENST00000315480 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
USP20-201ENST00000315480 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
USP20-201ENST00000315480 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
USP20-201ENST00000315480 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
USP20-201ENST00000315480 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
USP20-201ENST00000315480 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
USP20-201ENST00000315480 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
USP20-201ENST00000315480 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
USP20-201ENST00000315480 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
USP20-201ENST00000315480 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
USP20-201ENST00000315480 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
USP20-201ENST00000315480 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
USP20-201ENST00000315480 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
USP20-201ENST00000315480 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
USP20-201ENST00000315480 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
USP20-201ENST00000315480 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
USP20-201ENST00000315480 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
USP20-201ENST00000315480 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
USP20-201ENST00000315480 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
USP20-201ENST00000315480 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
USP20-201ENST00000315480 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
USP20-201ENST00000315480 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
USP20-201ENST00000315480 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 213.1 ms