RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 MT1EP04732 61 aa3.91□□□□□ -1.78
AMBRA1-201ENST00000314845 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
AMBRA1-201ENST00000314845 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
AMBRA1-201ENST00000314845 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
AMBRA1-201ENST00000314845 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.79
AMBRA1-201ENST00000314845 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
AMBRA1-201ENST00000314845 MUC2Q02817 5179 aa3.8□□□□□ -1.8
AMBRA1-201ENST00000314845 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
AMBRA1-201ENST00000314845 MT1MQ8N339 61 aa3.79□□□□□ -1.8
AMBRA1-201ENST00000314845 MT3P25713 68 aa3.75□□□□□ -1.81
AMBRA1-201ENST00000314845 MT4P47944 62 aa3.66□□□□□ -1.82
AMBRA1-201ENST00000314845 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
AMBRA1-201ENST00000314845 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
AMBRA1-201ENST00000314845 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
AMBRA1-201ENST00000314845 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
AMBRA1-201ENST00000314845 MT1AP04731 61 aa3.55□□□□□ -1.84
AMBRA1-201ENST00000314845 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
AMBRA1-201ENST00000314845 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
AMBRA1-201ENST00000314845 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
AMBRA1-201ENST00000314845 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
AMBRA1-201ENST00000314845 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
AMBRA1-201ENST00000314845 PRM1P04553 51 aa3.48□□□□□ -1.85
AMBRA1-201ENST00000314845 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
AMBRA1-201ENST00000314845 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
AMBRA1-201ENST00000314845 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
AMBRA1-201ENST00000314845 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
AMBRA1-201ENST00000314845 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
AMBRA1-201ENST00000314845 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
AMBRA1-201ENST00000314845 USH2AO75445 5202 aa3.37□□□□□ -1.87
AMBRA1-201ENST00000314845 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
AMBRA1-201ENST00000314845 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
AMBRA1-201ENST00000314845 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
AMBRA1-201ENST00000314845 LCE4AQ5TA78 99 aa3.28□□□□□ -1.89
AMBRA1-201ENST00000314845 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
AMBRA1-201ENST00000314845 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
AMBRA1-201ENST00000314845 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
AMBRA1-201ENST00000314845 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
AMBRA1-201ENST00000314845 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-201ENST00000314845 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
AMBRA1-201ENST00000314845 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
AMBRA1-201ENST00000314845 KMT2DO14686 5537 aa3.12□□□□□ -1.91
AMBRA1-201ENST00000314845 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.92
AMBRA1-201ENST00000314845 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
AMBRA1-201ENST00000314845 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
AMBRA1-201ENST00000314845 NEBP20929 6669 aa2.99□□□□□ -1.93
AMBRA1-201ENST00000314845 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
AMBRA1-201ENST00000314845 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
AMBRA1-201ENST00000314845 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
AMBRA1-201ENST00000314845 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
AMBRA1-201ENST00000314845 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
AMBRA1-201ENST00000314845 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
AMBRA1-201ENST00000314845 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
AMBRA1-201ENST00000314845 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
AMBRA1-201ENST00000314845 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
AMBRA1-201ENST00000314845 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
AMBRA1-201ENST00000314845 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
AMBRA1-201ENST00000314845 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
AMBRA1-201ENST00000314845 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
AMBRA1-201ENST00000314845 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
AMBRA1-201ENST00000314845 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
AMBRA1-201ENST00000314845 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
AMBRA1-201ENST00000314845 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
AMBRA1-201ENST00000314845 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
AMBRA1-201ENST00000314845 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
AMBRA1-201ENST00000314845 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
AMBRA1-201ENST00000314845 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
AMBRA1-201ENST00000314845 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
AMBRA1-201ENST00000314845 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
AMBRA1-201ENST00000314845 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
AMBRA1-201ENST00000314845 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
AMBRA1-201ENST00000314845 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
AMBRA1-201ENST00000314845 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
AMBRA1-201ENST00000314845 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
AMBRA1-201ENST00000314845 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
AMBRA1-201ENST00000314845 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
AMBRA1-201ENST00000314845 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
AMBRA1-201ENST00000314845 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms