RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 SPRR2AP35326 72 aa4.48□□□□□ -1.69
ZNF541-202ENST00000314121 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
ZNF541-202ENST00000314121 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
ZNF541-202ENST00000314121 MT1MQ8N339 61 aa4.36□□□□□ -1.71
ZNF541-202ENST00000314121 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
ZNF541-202ENST00000314121 SPRR2DP22532 72 aa4.32□□□□□ -1.72
ZNF541-202ENST00000314121 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
ZNF541-202ENST00000314121 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
ZNF541-202ENST00000314121 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
ZNF541-202ENST00000314121 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
ZNF541-202ENST00000314121 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
ZNF541-202ENST00000314121 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
ZNF541-202ENST00000314121 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
ZNF541-202ENST00000314121 USH2AO75445 5202 aa4.19□□□□□ -1.74
ZNF541-202ENST00000314121 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
ZNF541-202ENST00000314121 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
ZNF541-202ENST00000314121 PRM1P04553 51 aa4.14□□□□□ -1.75
ZNF541-202ENST00000314121 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
ZNF541-202ENST00000314121 MT3P25713 68 aa4.11□□□□□ -1.75
ZNF541-202ENST00000314121 KMT2DO14686 5537 aa4.08□□□□□ -1.76
ZNF541-202ENST00000314121 MT1AP04731 61 aa4.05□□□□□ -1.76
ZNF541-202ENST00000314121 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
ZNF541-202ENST00000314121 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
ZNF541-202ENST00000314121 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
ZNF541-202ENST00000314121 LCE2DQ5TA82 110 aaPredicted RBP3.96□□□□□ -1.78
ZNF541-202ENST00000314121 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
ZNF541-202ENST00000314121 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
ZNF541-202ENST00000314121 MT4P47944 62 aa3.82□□□□□ -1.8
ZNF541-202ENST00000314121 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
ZNF541-202ENST00000314121 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
ZNF541-202ENST00000314121 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
ZNF541-202ENST00000314121 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
ZNF541-202ENST00000314121 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
ZNF541-202ENST00000314121 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
ZNF541-202ENST00000314121 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
ZNF541-202ENST00000314121 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
ZNF541-202ENST00000314121 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
ZNF541-202ENST00000314121 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
ZNF541-202ENST00000314121 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
ZNF541-202ENST00000314121 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
ZNF541-202ENST00000314121 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
ZNF541-202ENST00000314121 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
ZNF541-202ENST00000314121 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
ZNF541-202ENST00000314121 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
ZNF541-202ENST00000314121 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
ZNF541-202ENST00000314121 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
ZNF541-202ENST00000314121 NEBP20929 6669 aa3.14□□□□□ -1.91
ZNF541-202ENST00000314121 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
ZNF541-202ENST00000314121 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
ZNF541-202ENST00000314121 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
ZNF541-202ENST00000314121 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
ZNF541-202ENST00000314121 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
ZNF541-202ENST00000314121 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
ZNF541-202ENST00000314121 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
ZNF541-202ENST00000314121 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
ZNF541-202ENST00000314121 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
ZNF541-202ENST00000314121 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
ZNF541-202ENST00000314121 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
ZNF541-202ENST00000314121 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
ZNF541-202ENST00000314121 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
ZNF541-202ENST00000314121 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
ZNF541-202ENST00000314121 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
ZNF541-202ENST00000314121 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
ZNF541-202ENST00000314121 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
ZNF541-202ENST00000314121 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
ZNF541-202ENST00000314121 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
ZNF541-202ENST00000314121 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
ZNF541-202ENST00000314121 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
ZNF541-202ENST00000314121 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
ZNF541-202ENST00000314121 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
ZNF541-202ENST00000314121 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
ZNF541-202ENST00000314121 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
ZNF541-202ENST00000314121 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
ZNF541-202ENST00000314121 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
ZNF541-202ENST00000314121 PHGR1C9JFL3 82 aa1.78□□□□□ -2.13
ZNF541-202ENST00000314121 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
ZNF541-202ENST00000314121 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 39.9 ms