RNA–Protein interactions for RNA: ENST00000312405.10

CAMSAP1-201, Transcript of calmodulin regulated spectrin associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CAMSAP1, Length 6,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMSAP1-201ENST00000312405 MT1LQ93083 61 aa3.73□□□□□ -1.81
CAMSAP1-201ENST00000312405 MT1EP04732 61 aa3.71□□□□□ -1.81
CAMSAP1-201ENST00000312405 FLGP20930 4061 aaPredicted RBP3.71□□□□□ -1.81
CAMSAP1-201ENST00000312405 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CAMSAP1-201ENST00000312405 MT3P25713 68 aa3.66□□□□□ -1.82
CAMSAP1-201ENST00000312405 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
CAMSAP1-201ENST00000312405 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
CAMSAP1-201ENST00000312405 LOC100996750A0A140TA64 210 aa3.64□□□□□ -1.83
CAMSAP1-201ENST00000312405 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
CAMSAP1-201ENST00000312405 MT1MQ8N339 61 aa3.62□□□□□ -1.83
CAMSAP1-201ENST00000312405 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
CAMSAP1-201ENST00000312405 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
CAMSAP1-201ENST00000312405 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.84
CAMSAP1-201ENST00000312405 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
CAMSAP1-201ENST00000312405 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
CAMSAP1-201ENST00000312405 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
CAMSAP1-201ENST00000312405 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
CAMSAP1-201ENST00000312405 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
CAMSAP1-201ENST00000312405 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
CAMSAP1-201ENST00000312405 RNF213Q63HN8 5207 aa3.46□□□□□ -1.86
CAMSAP1-201ENST00000312405 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
CAMSAP1-201ENST00000312405 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
CAMSAP1-201ENST00000312405 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
CAMSAP1-201ENST00000312405 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CAMSAP1-201ENST00000312405 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
CAMSAP1-201ENST00000312405 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
CAMSAP1-201ENST00000312405 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CAMSAP1-201ENST00000312405 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
CAMSAP1-201ENST00000312405 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
CAMSAP1-201ENST00000312405 PRM1P04553 51 aa3.35□□□□□ -1.87
CAMSAP1-201ENST00000312405 MUC2Q02817 5179 aa3.33□□□□□ -1.88
CAMSAP1-201ENST00000312405 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
CAMSAP1-201ENST00000312405 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
CAMSAP1-201ENST00000312405 MT1AP04731 61 aa3.29□□□□□ -1.88
CAMSAP1-201ENST00000312405 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
CAMSAP1-201ENST00000312405 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
CAMSAP1-201ENST00000312405 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
CAMSAP1-201ENST00000312405 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.91
CAMSAP1-201ENST00000312405 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
CAMSAP1-201ENST00000312405 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
CAMSAP1-201ENST00000312405 NEBP20929 6669 aa2.91□□□□□ -1.94
CAMSAP1-201ENST00000312405 KMT2DO14686 5537 aa2.9□□□□□ -1.95
CAMSAP1-201ENST00000312405 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
CAMSAP1-201ENST00000312405 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
CAMSAP1-201ENST00000312405 USH2AO75445 5202 aa2.88□□□□□ -1.95
CAMSAP1-201ENST00000312405 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
CAMSAP1-201ENST00000312405 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
CAMSAP1-201ENST00000312405 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
CAMSAP1-201ENST00000312405 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
CAMSAP1-201ENST00000312405 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
CAMSAP1-201ENST00000312405 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
CAMSAP1-201ENST00000312405 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
CAMSAP1-201ENST00000312405 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
CAMSAP1-201ENST00000312405 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
CAMSAP1-201ENST00000312405 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
CAMSAP1-201ENST00000312405 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
CAMSAP1-201ENST00000312405 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
CAMSAP1-201ENST00000312405 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
CAMSAP1-201ENST00000312405 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
CAMSAP1-201ENST00000312405 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
CAMSAP1-201ENST00000312405 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
CAMSAP1-201ENST00000312405 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
CAMSAP1-201ENST00000312405 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CAMSAP1-201ENST00000312405 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
CAMSAP1-201ENST00000312405 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
CAMSAP1-201ENST00000312405 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
CAMSAP1-201ENST00000312405 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
CAMSAP1-201ENST00000312405 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
CAMSAP1-201ENST00000312405 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
CAMSAP1-201ENST00000312405 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
CAMSAP1-201ENST00000312405 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
CAMSAP1-201ENST00000312405 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
CAMSAP1-201ENST00000312405 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
CAMSAP1-201ENST00000312405 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CAMSAP1-201ENST00000312405 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
CAMSAP1-201ENST00000312405 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CAMSAP1-201ENST00000312405 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms