RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 MT1BP07438 61 aa1.08□□□□□ -2.24
CLOCK-201ENST00000309964 LCE1AQ5T7P2 110 aa1.07□□□□□ -2.24
CLOCK-201ENST00000309964 KRTAP9-2Q9BYQ4 174 aa1.06□□□□□ -2.24
CLOCK-201ENST00000309964 LCE3EQ5T5B0 92 aa1.06□□□□□ -2.24
CLOCK-201ENST00000309964 MT1EP04732 61 aa1.05□□□□□ -2.24
CLOCK-201ENST00000309964 LCE3BQ5TA77 95 aa1.05□□□□□ -2.24
CLOCK-201ENST00000309964 OBSCNQ5VST9 7968 aa1.04□□□□□ -2.24
CLOCK-201ENST00000309964 MT1MQ8N339 61 aa1.04□□□□□ -2.24
CLOCK-201ENST00000309964 LPAP08519 4548 aa1.04□□□□□ -2.24
CLOCK-201ENST00000309964 HERC2O95714 4834 aa1.03□□□□□ -2.24
CLOCK-201ENST00000309964 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
CLOCK-201ENST00000309964 SYNE2Q8WXH0 6885 aaKnown RBP1.01□□□□□ -2.25
CLOCK-201ENST00000309964 LCE4AQ5TA78 99 aa1□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP6-3Q3LI67 103 aa1□□□□□ -2.25
CLOCK-201ENST00000309964 BIRC6Q9NR09 4857 aa1□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP2-3P0C7H8 128 aa1□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP2-4Q9BYR9 128 aa1□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP4-2Q9BYR5 136 aa1□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP4-8A0A0G2JLE6 195 aa0.99□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP4-8Q9BYQ9 185 aa0.99□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP19-2Q3LHN2 52 aa0.99□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP20-1Q3LI63 56 aa0.99□□□□□ -2.25
CLOCK-201ENST00000309964 LOC100996750A0A140TA64 210 aa0.98□□□□□ -2.25
CLOCK-201ENST00000309964 KRTAP4-6Q9BYQ5 205 aa0.98□□□□□ -2.25
CLOCK-201ENST00000309964 MUC17Q685J3 4493 aa0.97□□□□□ -2.25
CLOCK-201ENST00000309964 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP2-2Q9BYT5 123 aa0.96□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP2-1Q9BYU5 128 aa0.96□□□□□ -2.26
CLOCK-201ENST00000309964 FSIP2Q5CZC0 6907 aa0.95□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.95□□□□□ -2.26
CLOCK-201ENST00000309964 MT1AP04731 61 aa0.95□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP4-12Q9BQ66 201 aa0.95□□□□□ -2.26
CLOCK-201ENST00000309964 MT4P47944 62 aa0.94□□□□□ -2.26
CLOCK-201ENST00000309964 HMCN1Q96RW7 5635 aa0.94□□□□□ -2.26
CLOCK-201ENST00000309964 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP9-9Q9BYP9 154 aa0.94□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP9-4Q9BYQ2 154 aa0.94□□□□□ -2.26
CLOCK-201ENST00000309964 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP4-4Q9BYR3 166 aa0.92□□□□□ -2.26
CLOCK-201ENST00000309964 KRTAP19-7Q3SYF9 63 aa0.92□□□□□ -2.26
CLOCK-201ENST00000309964 LCE1DQ5T752 114 aa0.92□□□□□ -2.26
CLOCK-201ENST00000309964 LCE5AQ5TCM9 118 aa0.91□□□□□ -2.26
CLOCK-201ENST00000309964 MACF1Q9UPN3 7388 aaKnown RBP0.91□□□□□ -2.26
CLOCK-201ENST00000309964 LCE1BQ5T7P3 118 aa0.9□□□□□ -2.27
CLOCK-201ENST00000309964 MUC5ACP98088 5654 aa0.87□□□□□ -2.27
CLOCK-201ENST00000309964 PRM1P04553 51 aa0.87□□□□□ -2.27
CLOCK-201ENST00000309964 KRTAP5-9P26371 169 aa0.86□□□□□ -2.27
CLOCK-201ENST00000309964 GPR98Q8WXG9 6306 aa0.86□□□□□ -2.27
CLOCK-201ENST00000309964 KRTAP4-7Q9BYR0 210 aa0.85□□□□□ -2.27
CLOCK-201ENST00000309964 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
CLOCK-201ENST00000309964 MUC19Q7Z5P9 8384 aa0.83□□□□□ -2.28
CLOCK-201ENST00000309964 KRTAP5-3Q6L8H2 238 aa0.83□□□□□ -2.28
CLOCK-201ENST00000309964 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
CLOCK-201ENST00000309964 NEBP20929 6669 aa0.82□□□□□ -2.28
CLOCK-201ENST00000309964 LCE1CQ5T751 118 aa0.81□□□□□ -2.28
CLOCK-201ENST00000309964 LCE1EQ5T753 118 aa0.81□□□□□ -2.28
CLOCK-201ENST00000309964 LCE1FQ5T754 118 aa0.81□□□□□ -2.28
CLOCK-201ENST00000309964 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
CLOCK-201ENST00000309964 KRTAP4-3Q9BYR4 195 aa0.8□□□□□ -2.28
CLOCK-201ENST00000309964 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
CLOCK-201ENST00000309964 KRTAP5-5Q701N2 237 aaPredicted RBP0.79□□□□□ -2.28
CLOCK-201ENST00000309964 KRTAP4-9Q9BYQ8 210 aa0.77□□□□□ -2.29
CLOCK-201ENST00000309964 KRTAP9-6A8MVA2 160 aa0.75□□□□□ -2.29
CLOCK-201ENST00000309964 KRTAP5-4Q6L8H1 288 aa0.73□□□□□ -2.29
CLOCK-201ENST00000309964 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
CLOCK-201ENST00000309964 KRTAP4-11Q9BYQ6 195 aa0.71□□□□□ -2.3
CLOCK-201ENST00000309964 KRTAP5-2Q701N4 177 aa0.71□□□□□ -2.3
CLOCK-201ENST00000309964 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.67□□□□□ -2.3
CLOCK-201ENST00000309964 KRTAP5-7Q6L8G8 165 aa0.61□□□□□ -2.31
CLOCK-201ENST00000309964 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
CLOCK-201ENST00000309964 KRTAP5-8O75690 187 aa0.56□□□□□ -2.32
CLOCK-201ENST00000309964 KRTAP5-11Q6L8G4 156 aa0.55□□□□□ -2.32
CLOCK-201ENST00000309964 KRTAP5-1Q6L8H4 278 aa0.52□□□□□ -2.33
CLOCK-201ENST00000309964 KRTAP5-10Q6L8G5 202 aa0.51□□□□□ -2.33
CLOCK-201ENST00000309964 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
CLOCK-201ENST00000309964 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
CLOCK-201ENST00000309964 KRTAP21-2Q3LI59 83 aa0.43□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 103.5 ms