RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 KRTAP4-8Q9BYQ9 185 aa2.6□□□□□ -1.99
PCNX1-201ENST00000304743 MDN1Q9NU22 5596 aa2.59□□□□□ -2
PCNX1-201ENST00000304743 PRM1P04553 51 aa2.58□□□□□ -2
PCNX1-201ENST00000304743 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
PCNX1-201ENST00000304743 MUC2Q02817 5179 aa2.58□□□□□ -2
PCNX1-201ENST00000304743 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
PCNX1-201ENST00000304743 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
PCNX1-201ENST00000304743 KMT2DO14686 5537 aa2.54□□□□□ -2
PCNX1-201ENST00000304743 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
PCNX1-201ENST00000304743 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
PCNX1-201ENST00000304743 MT1LQ93083 61 aa2.5□□□□□ -2.01
PCNX1-201ENST00000304743 KRTAP4-7Q9BYR0 210 aa2.49□□□□□ -2.01
PCNX1-201ENST00000304743 MT1XP80297 61 aa2.47□□□□□ -2.01
PCNX1-201ENST00000304743 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
PCNX1-201ENST00000304743 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
PCNX1-201ENST00000304743 KRTAP9-2Q9BYQ4 174 aa2.45□□□□□ -2.02
PCNX1-201ENST00000304743 FCGBPQ9Y6R7 5405 aaPredicted RBP2.44□□□□□ -2.02
PCNX1-201ENST00000304743 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
PCNX1-201ENST00000304743 MT1BP07438 61 aa2.41□□□□□ -2.02
PCNX1-201ENST00000304743 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
PCNX1-201ENST00000304743 KRTAP9-6A0A140TA67 174 aa2.4□□□□□ -2.03
PCNX1-201ENST00000304743 KRTAP4-9Q9BYQ8 210 aa2.4□□□□□ -2.03
PCNX1-201ENST00000304743 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.03
PCNX1-201ENST00000304743 LOC100996750A0A140TA64 210 aa2.39□□□□□ -2.03
PCNX1-201ENST00000304743 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
PCNX1-201ENST00000304743 LCE2AQ5TA79 106 aaPredicted RBP2.34□□□□□ -2.03
PCNX1-201ENST00000304743 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.04
PCNX1-201ENST00000304743 KRTAP9-8Q9BYQ0 159 aa2.32□□□□□ -2.04
PCNX1-201ENST00000304743 KRTAP9-7A8MTY7 169 aa2.31□□□□□ -2.04
PCNX1-201ENST00000304743 MT1MQ8N339 61 aa2.31□□□□□ -2.04
PCNX1-201ENST00000304743 KRTAP2-3P0C7H8 128 aa2.31□□□□□ -2.04
PCNX1-201ENST00000304743 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
PCNX1-201ENST00000304743 KRTAP2-4Q9BYR9 128 aa2.31□□□□□ -2.04
PCNX1-201ENST00000304743 MT1EP04732 61 aa2.31□□□□□ -2.04
PCNX1-201ENST00000304743 KRTAP17-1Q9BYP8 105 aa2.27□□□□□ -2.05
PCNX1-201ENST00000304743 KRTAP9-3Q9BYQ3 159 aa2.27□□□□□ -2.05
PCNX1-201ENST00000304743 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
PCNX1-201ENST00000304743 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.06
PCNX1-201ENST00000304743 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
PCNX1-201ENST00000304743 MT1AP04731 61 aa2.2□□□□□ -2.06
PCNX1-201ENST00000304743 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
PCNX1-201ENST00000304743 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
PCNX1-201ENST00000304743 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
PCNX1-201ENST00000304743 NEBP20929 6669 aa2.11□□□□□ -2.07
PCNX1-201ENST00000304743 KRTAP9-6A8MVA2 160 aa2.09□□□□□ -2.08
PCNX1-201ENST00000304743 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.08
PCNX1-201ENST00000304743 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
PCNX1-201ENST00000304743 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
PCNX1-201ENST00000304743 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
PCNX1-201ENST00000304743 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.99□□□□□ -2.09
PCNX1-201ENST00000304743 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
PCNX1-201ENST00000304743 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
PCNX1-201ENST00000304743 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
PCNX1-201ENST00000304743 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.1
PCNX1-201ENST00000304743 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
PCNX1-201ENST00000304743 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
PCNX1-201ENST00000304743 KRTAP4-6Q9BYQ5 205 aa1.87□□□□□ -2.11
PCNX1-201ENST00000304743 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
PCNX1-201ENST00000304743 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
PCNX1-201ENST00000304743 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
PCNX1-201ENST00000304743 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
PCNX1-201ENST00000304743 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
PCNX1-201ENST00000304743 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
PCNX1-201ENST00000304743 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
PCNX1-201ENST00000304743 KRTAP5-4Q6L8H1 288 aa1.42□□□□□ -2.18
PCNX1-201ENST00000304743 KRTAP5-9P26371 169 aa1.38□□□□□ -2.19
PCNX1-201ENST00000304743 KRTAP5-3Q6L8H2 238 aa1.32□□□□□ -2.2
PCNX1-201ENST00000304743 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
PCNX1-201ENST00000304743 KRTAP5-8O75690 187 aa1.17□□□□□ -2.22
PCNX1-201ENST00000304743 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
PCNX1-201ENST00000304743 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
PCNX1-201ENST00000304743 KRTAP5-1Q6L8H4 278 aa0.95□□□□□ -2.26
PCNX1-201ENST00000304743 KRTAP5-11Q6L8G4 156 aa0.93□□□□□ -2.26
PCNX1-201ENST00000304743 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
PCNX1-201ENST00000304743 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
PCNX1-201ENST00000304743 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.82□□□□□ -2.28
PCNX1-201ENST00000304743 KRTAP5-7Q6L8G8 165 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 65.8 ms