RNA–Protein interactions for RNA: ENST00000301740.12

SRRM2-201, Transcript of serine/arginine repetitive matrix 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM2, Length 9,353 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-201ENST00000301740 LRP2P98164 4655 aa4.43□□□□□ -1.7
SRRM2-201ENST00000301740 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
SRRM2-201ENST00000301740 RYR3Q15413 4870 aa4.39□□□□□ -1.71
SRRM2-201ENST00000301740 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
SRRM2-201ENST00000301740 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
SRRM2-201ENST00000301740 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
SRRM2-201ENST00000301740 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
SRRM2-201ENST00000301740 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
SRRM2-201ENST00000301740 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
SRRM2-201ENST00000301740 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
SRRM2-201ENST00000301740 KRTAP19-2Q3LHN2 52 aa4.32□□□□□ -1.72
SRRM2-201ENST00000301740 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
SRRM2-201ENST00000301740 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
SRRM2-201ENST00000301740 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
SRRM2-201ENST00000301740 PCLOQ9Y6V0 5065 aa4.26□□□□□ -1.73
SRRM2-201ENST00000301740 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
SRRM2-201ENST00000301740 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
SRRM2-201ENST00000301740 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
SRRM2-201ENST00000301740 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
SRRM2-201ENST00000301740 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
SRRM2-201ENST00000301740 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
SRRM2-201ENST00000301740 HERC2O95714 4834 aa4□□□□□ -1.77
SRRM2-201ENST00000301740 HYDINQ4G0P3 5121 aa3.99□□□□□ -1.77
SRRM2-201ENST00000301740 HERC1Q15751 4861 aa3.95□□□□□ -1.78
SRRM2-201ENST00000301740 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
SRRM2-201ENST00000301740 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
SRRM2-201ENST00000301740 RYR2Q92736 4967 aa3.87□□□□□ -1.79
SRRM2-201ENST00000301740 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
SRRM2-201ENST00000301740 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
SRRM2-201ENST00000301740 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
SRRM2-201ENST00000301740 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SRRM2-201ENST00000301740 HMCN2Q8NDA2 5059 aa3.67□□□□□ -1.82
SRRM2-201ENST00000301740 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.66□□□□□ -1.82
SRRM2-201ENST00000301740 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.83
SRRM2-201ENST00000301740 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
SRRM2-201ENST00000301740 MUC2Q02817 5179 aa3.48□□□□□ -1.85
SRRM2-201ENST00000301740 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
SRRM2-201ENST00000301740 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
SRRM2-201ENST00000301740 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
SRRM2-201ENST00000301740 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
SRRM2-201ENST00000301740 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
SRRM2-201ENST00000301740 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
SRRM2-201ENST00000301740 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
SRRM2-201ENST00000301740 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
SRRM2-201ENST00000301740 KMT2DO14686 5537 aa3.18□□□□□ -1.9
SRRM2-201ENST00000301740 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
SRRM2-201ENST00000301740 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.9
SRRM2-201ENST00000301740 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
SRRM2-201ENST00000301740 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
SRRM2-201ENST00000301740 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
SRRM2-201ENST00000301740 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SRRM2-201ENST00000301740 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
SRRM2-201ENST00000301740 NEBP20929 6669 aa2.95□□□□□ -1.94
SRRM2-201ENST00000301740 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
SRRM2-201ENST00000301740 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
SRRM2-201ENST00000301740 USH2AO75445 5202 aa2.81□□□□□ -1.96
SRRM2-201ENST00000301740 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SRRM2-201ENST00000301740 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
SRRM2-201ENST00000301740 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
SRRM2-201ENST00000301740 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
SRRM2-201ENST00000301740 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
SRRM2-201ENST00000301740 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
SRRM2-201ENST00000301740 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
SRRM2-201ENST00000301740 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
SRRM2-201ENST00000301740 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
SRRM2-201ENST00000301740 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
SRRM2-201ENST00000301740 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
SRRM2-201ENST00000301740 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
SRRM2-201ENST00000301740 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
SRRM2-201ENST00000301740 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
SRRM2-201ENST00000301740 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
SRRM2-201ENST00000301740 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
SRRM2-201ENST00000301740 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
SRRM2-201ENST00000301740 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
SRRM2-201ENST00000301740 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
SRRM2-201ENST00000301740 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
SRRM2-201ENST00000301740 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms