RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
GCN1-201ENST00000300648 MUC17Q685J3 4493 aa3.23□□□□□ -1.89
GCN1-201ENST00000300648 LCE1DQ5T752 114 aa3.21□□□□□ -1.89
GCN1-201ENST00000300648 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
GCN1-201ENST00000300648 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
GCN1-201ENST00000300648 LCE2AQ5TA79 106 aaPredicted RBP3.18□□□□□ -1.9
GCN1-201ENST00000300648 MT4P47944 62 aa3.17□□□□□ -1.9
GCN1-201ENST00000300648 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
GCN1-201ENST00000300648 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
GCN1-201ENST00000300648 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
GCN1-201ENST00000300648 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
GCN1-201ENST00000300648 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
GCN1-201ENST00000300648 LPAP08519 4548 aa3.1□□□□□ -1.91
GCN1-201ENST00000300648 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
GCN1-201ENST00000300648 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
GCN1-201ENST00000300648 HYDINQ4G0P3 5121 aa3.05□□□□□ -1.92
GCN1-201ENST00000300648 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
GCN1-201ENST00000300648 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
GCN1-201ENST00000300648 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
GCN1-201ENST00000300648 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
GCN1-201ENST00000300648 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
GCN1-201ENST00000300648 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
GCN1-201ENST00000300648 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
GCN1-201ENST00000300648 RNF213Q63HN8 5207 aa2.9□□□□□ -1.95
GCN1-201ENST00000300648 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.95
GCN1-201ENST00000300648 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
GCN1-201ENST00000300648 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
GCN1-201ENST00000300648 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
GCN1-201ENST00000300648 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
GCN1-201ENST00000300648 HMCN2Q8NDA2 5059 aa2.8□□□□□ -1.96
GCN1-201ENST00000300648 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
GCN1-201ENST00000300648 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
GCN1-201ENST00000300648 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
GCN1-201ENST00000300648 UBR4Q5T4S7 5183 aa2.76□□□□□ -1.97
GCN1-201ENST00000300648 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
GCN1-201ENST00000300648 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
GCN1-201ENST00000300648 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
GCN1-201ENST00000300648 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
GCN1-201ENST00000300648 FSIP2Q5CZC0 6907 aa2.67□□□□□ -1.98
GCN1-201ENST00000300648 MUC2Q02817 5179 aa2.64□□□□□ -1.99
GCN1-201ENST00000300648 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
GCN1-201ENST00000300648 NEBP20929 6669 aa2.46□□□□□ -2.02
GCN1-201ENST00000300648 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
GCN1-201ENST00000300648 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
GCN1-201ENST00000300648 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.02
GCN1-201ENST00000300648 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
GCN1-201ENST00000300648 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
GCN1-201ENST00000300648 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
GCN1-201ENST00000300648 USH2AO75445 5202 aa2.3□□□□□ -2.04
GCN1-201ENST00000300648 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
GCN1-201ENST00000300648 KRTAP4-6Q9BYQ5 205 aa2.25□□□□□ -2.05
GCN1-201ENST00000300648 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
GCN1-201ENST00000300648 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
GCN1-201ENST00000300648 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
GCN1-201ENST00000300648 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
GCN1-201ENST00000300648 KMT2DO14686 5537 aa2.14□□□□□ -2.07
GCN1-201ENST00000300648 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.07
GCN1-201ENST00000300648 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
GCN1-201ENST00000300648 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
GCN1-201ENST00000300648 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
GCN1-201ENST00000300648 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
GCN1-201ENST00000300648 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
GCN1-201ENST00000300648 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
GCN1-201ENST00000300648 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
GCN1-201ENST00000300648 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
GCN1-201ENST00000300648 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
GCN1-201ENST00000300648 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
GCN1-201ENST00000300648 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
GCN1-201ENST00000300648 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
GCN1-201ENST00000300648 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
GCN1-201ENST00000300648 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
GCN1-201ENST00000300648 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
GCN1-201ENST00000300648 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
GCN1-201ENST00000300648 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
GCN1-201ENST00000300648 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
GCN1-201ENST00000300648 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
GCN1-201ENST00000300648 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms